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L2_031_000G1_scaffold_819

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_819_1
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(56..235)
DNA (180bp) protein (60aa)
Cold-shock DNA-binding domain protein n=7 Tax=Firmicutes RepID=E4M087_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY87919.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
cold-shock DNA-binding domain-containing protein
L2_031_000G1_scaffold_819_2
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(580..777)
DNA (198bp) protein (66aa)
Cold-shock DNA-binding domain protein n=7 Tax=Firmicutes RepID=E4M088_9CLOT
Cold shock-like protein CspC {ECO:0000313|EMBL:EHO31118.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
cold-shock DNA-binding domain protein
L2_031_000G1_scaffold_819_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(805..1473)
DNA (669bp) protein (223aa)
ComF family protein n=2 Tax=Firmicutes RepID=H1B696_9FIRM
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:EQJ54774.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Predicted amidophosphoribosyltransferases
L2_031_000G1_scaffold_819_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1470..2624)
DNA (1155bp) protein (385aa)
Helicase conserved C-terminal domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NBQ8_CLODI
Helicase conserved C-terminal domain protein {ECO:0000313|EMBL:EQJ54773.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)
L2_031_000G1_scaffold_819_5
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2782..3792)
DNA (1011bp) protein (337aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=7 Tax=Firmicutes RepID=E4M091_9CLOT
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ENY87951.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_031_000G1_scaffold_819_6
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4050..5048)
DNA (999bp) protein (333aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B080_9FIRM
Glucosamine-fructose-6-phosphate aminotransferase {ECO:0000313|EMBL:KGJ54808.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
Predicted phosphosugar isomerases
L2_031_000G1_scaffold_819_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5084..5914)
DNA (831bp) protein (277aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1B081_9FIRM
PTS system mannose/fructose/sorbose IID component family protein {ECO:0000313|EMBL:EQJ54770.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L2_031_000G1_scaffold_819_8
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5904..6674)
DNA (771bp) protein (257aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B082_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC87044.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
PTS system sorbose-specific transporter subunit IIC
L2_031_000G1_scaffold_819_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6760..7236)
DNA (477bp) protein (159aa)
PTS system sorbose subfamily IIB component n=4 Tax=Firmicutes RepID=E4M095_9CLOT
PTS system sorbose subIIB component family protein {ECO:0000313|EMBL:EQJ54768.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system sorbose subfamily transporter subunit IIB
L2_031_000G1_scaffold_819_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7402..7821)
DNA (420bp) protein (140aa)
PTS system fructose IIA component n=5 Tax=Firmicutes RepID=E4M096_9CLOT
Putative PTS permease {ECO:0000313|EMBL:EQJ54767.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS sugar transporter
L2_031_000G1_scaffold_819_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7835..8656)
DNA (822bp) protein (274aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B085_9FIRM
Xylose isomerase-like TIM barrel family protein {ECO:0000313|EMBL:EQJ54766.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
sugar phosphate isomerase/epimerase
L2_031_000G1_scaffold_819_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8646..11402)
DNA (2757bp) protein (919aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B687_9FIRM
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EQJ54765.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
sigma-54 dependent transcription regulator
L2_031_000G1_scaffold_819_13
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12016..12999
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B686_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31107.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_031_000G1_scaffold_819_14
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13404..13841
DNA (438bp) protein (146aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1B088_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC87038.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
response regulator receiver protein
L2_031_000G1_scaffold_819_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14063..14518)
DNA (456bp) protein (152aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LX20_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ54763.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_000G1_scaffold_819_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14515..15642)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LX19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36680.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_031_000G1_scaffold_819_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15639..16496)
DNA (858bp) protein (286aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LX18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ54761.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_000G1_scaffold_819_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16500..18152)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LX17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ54760.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_000G1_scaffold_819_19
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18351..18896)
DNA (546bp) protein (182aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LX16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36674.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_031_000G1_scaffold_819_20
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19044..19478)
DNA (435bp) protein (145aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LX15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC87032.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Displaying 20 items

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