ggKbase home page

L2_031_000G1_scaffold_916

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_916_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..1638
DNA (1638bp) protein (546aa)
Peptidoglycan-binding protein n=9 Tax=Clostridium RepID=N9VZN6_9CLOT
Peptidoglycan-binding protein {ECO:0000313|EMBL:ENZ12155.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
peptidoglycan-binding domain-containing protein
L2_031_000G1_scaffold_916_2
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1682..2377
DNA (696bp) protein (232aa)
Uncharacterized protein n=17 Tax=Clostridium RepID=A8RIX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64218.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_031_000G1_scaffold_916_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2386..4764
DNA (2379bp) protein (793aa)
Integral membrane sensor signal transduction histidine kinase n=10 Tax=Clostridium RepID=N9X8H2_9CLOT
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ENZ12153.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
integral membrane sensor signal transduction histidine kinase
L2_031_000G1_scaffold_916_4
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4860..5609)
DNA (750bp) protein (250aa)
Aminoglycoside phosphotransferase n=10 Tax=Clostridium RepID=N9WQB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24721.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
aminoglycoside phosphotransferase
L2_031_000G1_scaffold_916_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5632..7521)
DNA (1890bp) protein (630aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=9 Tax=Clostridium RepID=G5HXW3_9CLOT
L2_031_000G1_scaffold_916_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7523..8863)
DNA (1341bp) protein (447aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Alpha amylase n=8 Tax=Clostridium RepID=N9VZN0_9CLOT
Glycosidases
L2_031_000G1_scaffold_916_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8932..9186)
DNA (255bp) protein (85aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9XJA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12149.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_031_000G1_scaffold_916_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9282..9635)
DNA (354bp) protein (118aa)
ArsR family transcriptional regulator n=9 Tax=Clostridium RepID=N9X8G9_9CLOT
ArsR family transcriptional regulator {ECO:0000313|EMBL:ENZ12148.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ArsR family transcriptional regulator
L2_031_000G1_scaffold_916_9
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9965..10483
DNA (519bp) protein (173aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WQB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24716.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
peptidase A24A prepilin type IV
L2_031_000G1_scaffold_916_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10540..11544
DNA (1005bp) protein (335aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VZ82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12146.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_031_000G1_scaffold_916_11
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11594..12793
DNA (1200bp) protein (400aa)
Type II secretion system protein n=8 Tax=Clostridium RepID=N9VZM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24714.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
type II secretion system protein E
L2_031_000G1_scaffold_916_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12732..13592
DNA (861bp) protein (287aa)
Tight adherence protein B n=8 Tax=Clostridium RepID=N9XJ93_9CLOT
Tight adherence protein B {ECO:0000313|EMBL:ENZ65460.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
type II secretion system F domain-containing protein
L2_031_000G1_scaffold_916_13
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13600..14880
DNA (1281bp) protein (427aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9X8G3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24712.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_000G1_scaffold_916_14
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14899..15078
DNA (180bp) protein (60aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WQA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24711.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_000G1_scaffold_916_15
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15078..17057
DNA (1980bp) protein (660aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VZ74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24710.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_000G1_scaffold_916_16
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17113..18108
DNA (996bp) protein (332aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9VZM1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24709.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_000G1_scaffold_916_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18130..18681
DNA (552bp) protein (184aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9XJ86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65465.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_916_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18729..19070
DNA (342bp) protein (114aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9X8F9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65466.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_916_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19060..20511
DNA (1452bp) protein (484aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WQA7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12036.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
FOG: FHA domain
L2_031_000G1_scaffold_916_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20691..21311
DNA (621bp) protein (207aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VZ70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65468.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
rhomboid family protein
L2_031_000G1_scaffold_916_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21354..21770
DNA (417bp) protein (139aa)
Cell cycle regulation histidine triad (HIT) protein n=10 Tax=Clostridium RepID=N9VZL7_9CLOT
Cell cycle regulation histidine triad (HIT) protein {ECO:0000313|EMBL:ENZ12034.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
L2_031_000G1_scaffold_916_22
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21776..22327
DNA (552bp) protein (184aa)
Sigma-70 family RNA polymerase sigma factor n=9 Tax=Clostridium RepID=N9XJ81_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24703.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
RNA polymerase sigma factor, sigma-70 family
L2_031_000G1_scaffold_916_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22330..23394)
DNA (1065bp) protein (355aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=10 Tax=Clostridium RepID=G5HXY1_9CLOT
L2_031_000G1_scaffold_916_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23652..24146
DNA (495bp) protein (165aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9WQA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65472.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_916_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24124..24681
DNA (558bp) protein (186aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VZ64_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65473.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_916_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24811..25053)
DNA (243bp) protein (81aa)
Uncharacterized protein n=15 Tax=Clostridium RepID=A8RIU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12029.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_031_000G1_scaffold_916_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25198..25893
DNA (696bp) protein (232aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
MTA/SAH nucleosidase (EC:3.2.2.9)
MTA/SAH nucleosidase n=10 Tax=Clostridium RepID=G5HXY5_9CLOT
L2_031_000G1_scaffold_916_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26066..26224
DNA (159bp) protein (53aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9Y226_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65476.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_916_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26249..26728)
DNA (480bp) protein (160aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9WQA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65477.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_916_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26786..27220
DNA (435bp) protein (145aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9VZ58_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65478.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
transposase
Displaying items 1-30 of 44 in total

View Taxonomy