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L2_031_000G1_scaffold_2012

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_2012_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1347
DNA (1347bp) protein (449aa)
Radical SAM domain protein n=3 Tax=Lachnospiraceae RepID=A7B8M8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20222.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Fe-S oxidoreductase
L2_031_000G1_scaffold_2012_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1331..2035
DNA (705bp) protein (235aa)
Radical SAM-linked protein n=2 Tax=Lachnospiraceae RepID=V8BYH9_RUMGN
Radical SAM-linked protein {ECO:0000313|EMBL:ETD20223.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L2_031_000G1_scaffold_2012_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2081..3322
DNA (1242bp) protein (414aa)
Ribonucleases G and E (EC:3.1.26.-)
Ribonuclease, Rne/Rng family n=2 Tax=Ruminococcus gnavus RepID=A7B8M6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20224.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_031_000G1_scaffold_2012_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3345..3794
DNA (450bp) protein (150aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8M5_RUMGN
ybaK/ebsC protein
L2_031_000G1_scaffold_2012_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3942..5261
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=4 Tax=Clostridiales RepID=F7JVY0_9FIRM
L2_031_000G1_scaffold_2012_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5278..5691
DNA (414bp) protein (138aa)
CBS domain protein n=4 Tax=Clostridiales RepID=A7B306_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48452.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
FOG: CBS domain
L2_031_000G1_scaffold_2012_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5836..6144
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=4 Tax=Clostridiales RepID=A7B305_RUMGN
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
LSU ribosomal protein L21P
L2_031_000G1_scaffold_2012_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6153..6485
DNA (333bp) protein (111aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B304_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48450.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted ribosomal protein
L2_031_000G1_scaffold_2012_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6491..6775
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=4 Tax=Clostridiales RepID=A7B303_RUMGN
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
LSU ribosomal protein L27P
L2_031_000G1_scaffold_2012_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6886..7188
DNA (303bp) protein (101aa)
GTPase Obg n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLP0_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Obg family GTPase CgtA
L2_031_000G1_scaffold_2012_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7161..8006
DNA (846bp) protein (282aa)
GTPase Obg n=3 Tax=Lachnospiraceae RepID=A7B301_RUMGN
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Obg family GTPase CgtA
L2_031_000G1_scaffold_2012_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8039..8329
DNA (291bp) protein (97aa)
RNA-binding protein, YhbY family n=4 Tax=Clostridiales RepID=A7B300_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66599.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
conserved hypothetical protein TIGR00253
L2_031_000G1_scaffold_2012_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8339..8962
DNA (624bp) protein (208aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Nicotinate (Nicotinamide) nucleotide adenylyltransferase n=4 Tax=Clostridiales RepID=V8BYI9_RUMGN
hypothetical protein
L2_031_000G1_scaffold_2012_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8959..9543
DNA (585bp) protein (195aa)
Hydrolase, HD family n=4 Tax=Clostridiales RepID=A7B2Z8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48445.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
conserved hypothetical protein TIGR00488
L2_031_000G1_scaffold_2012_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9579..9929
DNA (351bp) protein (117aa)
Ribosomal silencing factor RsfS n=4 Tax=Clostridiales RepID=A7B2Z7_RUMGN
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
iojap-related protein
L2_031_000G1_scaffold_2012_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10013..10630)
DNA (618bp) protein (206aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor n=4 Tax=Clostridiales RepID=A7B2Z6_RUMGN
L2_031_000G1_scaffold_2012_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10841..12580
DNA (1740bp) protein (580aa)
ABC transporter, ATP-binding protein n=3 Tax=Lachnospiraceae RepID=A7B2Z5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20237.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ABC-type multidrug transport system, ATPase and permease components
L2_031_000G1_scaffold_2012_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12573..14375
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66593.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC-type multidrug transport system, ATPase and permease components
L2_031_000G1_scaffold_2012_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14496..14813
DNA (318bp) protein (106aa)
LysM domain protein n=4 Tax=Clostridiales RepID=A7B2Z3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48440.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
peptidoglycan-binding lysin domain-containing protein
L2_031_000G1_scaffold_2012_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15018..15263
DNA (246bp) protein (82aa)
2Fe-2S iron-sulfur cluster binding domain protein n=3 Tax=Lachnospiraceae RepID=A7B2Z1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48439.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Uncharacterized metal-binding protein
L2_031_000G1_scaffold_2012_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15479..16042
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U619_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD20241.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Site-specific recombinase XerD
Displaying 21 items

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