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L2_031_000G1_scaffold_2500

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_2500_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..288)
DNA (288bp) protein (96aa)
ATP-binding cassette protein, ChvD family n=5 Tax=Bifidobacterium breve RepID=F6C6Q4_BIFBA
ATP-binding protein of ABC transporter system
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:ABE96161.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_031_000G1_scaffold_2500_2
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

707..1264
DNA (558bp) protein (186aa)
Putative cytochrome oxidase assembly protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SIV4_9FIRM
Putative cytochrome oxidase assembly protein {ECO:0000313|EMBL:CCZ46651.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L2_031_000G1_scaffold_2500_3
Bifidobacterium gallicum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1292..1510
DNA (219bp) protein (73aa)
DNA-binding helix-turn-helix protein n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NSF9_9BIFI
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KFI58675.1}; DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFA23611.1}; TaxID=561180 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallicum DSM 20093 = LMG 11596.;"
Predicted transcriptional regulator
L2_031_000G1_scaffold_2500_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1711..1968)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CFT0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI43755.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L2_031_000G1_scaffold_2500_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1965..2441)
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=U2DUD8_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI43754.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_031_000G1_scaffold_2500_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2438..2662)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=U2DP99_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI43753.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_031_000G1_scaffold_2500_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3630..3878
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBD8_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:KEY33441.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
acetyltransferase
L2_031_000G1_scaffold_2500_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3885..4331)
DNA (447bp) protein (149aa)
Transcriptional regulator, MerR family n=2 Tax=Bifidobacterium RepID=C4FHB5_9BIFI
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EEQ55333.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
transcriptional regulator
L2_031_000G1_scaffold_2500_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4571..5431
DNA (861bp) protein (287aa)
Organophosphate reductase n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBE0_BIFLI
2,5-diketo-D-gluconic acid reductase {ECO:0000313|EMBL:KEY33443.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
aldo/keto reductase family
L2_031_000G1_scaffold_2500_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5474..5935
DNA (462bp) protein (154aa)
Flavin reductase {ECO:0000313|EMBL:EEQ55335.1}; EC=1.7.-.- {ECO:0000313|EMBL:EEQ55335.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Flavin reductase n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBE1_BIFLI
hypothetical protein
L2_031_000G1_scaffold_2500_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5948..6607
DNA (660bp) protein (220aa)
Flavodoxin family protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBE2_BIFLI
Flavodoxin {ECO:0000313|EMBL:KEY33445.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L2_031_000G1_scaffold_2500_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6735..7634
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBE3_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:KEY33446.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Predicted peptidase
L2_031_000G1_scaffold_2500_13
unknown

Not on your lists

comp(7678..7887)
DNA (210bp) protein (70aa)

This feature has no annotations

L2_031_000G1_scaffold_2500_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8226..8738
DNA (513bp) protein (171aa)
Acetyltransferase, GNAT family n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBE6_BIFLI
GNAT family acetyltransferase {ECO:0000313|EMBL:KEY33448.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
GCN5 family acetyltransferase
L2_031_000G1_scaffold_2500_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8796..9221)
DNA (426bp) protein (142aa)
Peptide deformylase n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBE7_BIFLI
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
peptide deformylase
L2_031_000G1_scaffold_2500_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9297..10268
DNA (972bp) protein (324aa)
Putative riboflavin biosynthesis protein RibD n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBE8_BIFLI
Putative riboflavin biosynthesis protein RibD {ECO:0000313|EMBL:EEQ55342.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L2_031_000G1_scaffold_2500_17
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10375..10785
DNA (411bp) protein (137aa)
Transcriptional regulator, PadR family n=1 Tax=Clostridium sp. MSTE9 RepID=J0WYV5_9CLOT
PadR family transcriptional regulator
PadR family transcriptional regulator {ECO:0000313|EMBL:AIZ14072.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_031_000G1_scaffold_2500_18
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10782..11447
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Desulfitobacterium hafniense RepID=UPI00036A4FBC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ15392.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_031_000G1_scaffold_2500_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11585..11767
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:KEY29147.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_031_000G1_scaffold_2500_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11776..12120
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MQ79_BIFLS
hypothetical protein
Transposase, Mutator family {ECO:0000313|EMBL:CEF11206.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L2_031_000G1_scaffold_2500_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12415..12705
DNA (291bp) protein (97aa)
Major facilitator superfamily MFS_1 n=2 Tax=Bifidobacterium longum RepID=B7GP58_BIFLS
MFS transporter
Transporter {ECO:0000313|EMBL:AHJ19307.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_031_000G1_scaffold_2500_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12681..13403
DNA (723bp) protein (241aa)
Major facilitator superfamily MFS_1 n=2 Tax=Bifidobacterium longum RepID=B7GP58_BIFLS
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACJ51670.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_031_000G1_scaffold_2500_23
unknown

Not on your lists

13577..13702
DNA (126bp) protein (42aa)

This feature has no annotations

L2_031_000G1_scaffold_2500_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14614..15324
DNA (711bp) protein (237aa)
Putative transposase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MQ81_BIFLS
putative transposase
Transposase, Mutator family {ECO:0000313|EMBL:CEF02708.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L2_031_000G1_scaffold_2500_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15524..16366
DNA (843bp) protein (281aa)
ABC transporter related n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP60_BIFLS
putative ABC transporter ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ACJ51672.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_031_000G1_scaffold_2500_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16372..19401
DNA (3030bp) protein (1010aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP61_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:ACJ51673.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
hypothetical protein
L2_031_000G1_scaffold_2500_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19447..20064
DNA (618bp) protein (206aa)
Transcriptional regulator, PadR-like family n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP62_BIFLS
PadR family transcriptional regulator {ECO:0000313|EMBL:KEY30514.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L2_031_000G1_scaffold_2500_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20237..20545
DNA (309bp) protein (103aa)
Major facilitator superfamily MFS_1 n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP64_BIFLS
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACJ51676.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Displaying 28 items

View Taxonomy