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L2_031_000G1_scaffold_2536

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_2536_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

144..833
DNA (690bp) protein (230aa)
Choloylglycine hydrolase n=6 Tax=Clostridium clostridioforme RepID=N9X131_9CLOT
Choloylglycine hydrolase {ECO:0000313|EMBL:ENZ58597.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
choloylglycine hydrolase
L2_031_000G1_scaffold_2536_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1078..1557
DNA (480bp) protein (160aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9VH64_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58598.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
AraC family transcriptional regulator
L2_031_000G1_scaffold_2536_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1779..2867)
DNA (1089bp) protein (363aa)
DctP family TRAP transporter solute receptor n=7 Tax=Clostridium RepID=N9VHV6_9CLOT
DctP family TRAP transporter solute receptor {ECO:0000313|EMBL:ENZ58599.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
TRAP dicarboxylate family transporter subunit DctP
L2_031_000G1_scaffold_2536_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2864..4102)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9X271_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58600.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
yesN; DNA-binding response regulator
L2_031_000G1_scaffold_2536_5
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4095..5336)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9WR48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61325.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
signal transduction histidine kinase, LytS
L2_031_000G1_scaffold_2536_6
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5333..6337)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9X125_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61324.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
L2_031_000G1_scaffold_2536_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6414..7496)
DNA (1083bp) protein (361aa)
TRAP transporter, DctM subunit n=9 Tax=Clostridium RepID=N9VH58_9CLOT
TRAP transporter, DctM subunit {ECO:0000313|EMBL:ENZ10505.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
TRAP dicarboxylate transporter, DctM subunit
L2_031_000G1_scaffold_2536_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7493..7999)
DNA (507bp) protein (169aa)
C4-dicarboxylate transport system, small permease component n=10 Tax=Clostridium RepID=N9VHV0_9CLOT
C4-dicarboxylate transport system, small permease component {ECO:0000313|EMBL:ENZ10504.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
C4-dicarboxylate transport system, small permease component
L2_031_000G1_scaffold_2536_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8031..9101)
DNA (1071bp) protein (357aa)
DctP family TRAP transporter solute receptor n=6 Tax=Clostridium clostridioforme RepID=N9X266_9CLOT
DctP family TRAP transporter solute receptor {ECO:0000313|EMBL:ENZ58605.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
TRAP dicarboxylate transporter, DctP subunit
L2_031_000G1_scaffold_2536_10
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9284..9763)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Ribosomal RNA large subunit methyltransferase H n=7 Tax=Clostridium RepID=N9WR41_9CLOT
conserved hypothetical protein TIGR00246
L2_031_000G1_scaffold_2536_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9767..10258)
DNA (492bp) protein (164aa)
Acetyltransferase n=7 Tax=Clostridium RepID=N9X122_9CLOT
Acetyltransferase {ECO:0000313|EMBL:ENZ58607.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Acetyltransferases
L2_031_000G1_scaffold_2536_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10291..10998)
DNA (708bp) protein (236aa)
Two-component system response regulator n=8 Tax=Clostridium RepID=N9VH51_9CLOT
Two-component system response regulator {ECO:0000313|EMBL:ENZ58608.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_031_000G1_scaffold_2536_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11060..11887)
DNA (828bp) protein (276aa)
ComEA protein n=7 Tax=Clostridium RepID=N9VHU5_9CLOT
ComEA protein {ECO:0000313|EMBL:ENZ58609.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
competence protein ComEA helix-hairpin-helix repeat region
L2_031_000G1_scaffold_2536_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11984..12373)
DNA (390bp) protein (130aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9X258_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ10498.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_031_000G1_scaffold_2536_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12458..13072
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=N9YRR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58611.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_2536_16
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13153..13698)
DNA (546bp) protein (182aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9X118_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25394.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_000G1_scaffold_2536_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13962..14159
DNA (198bp) protein (66aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8RS61_9CLOT
Cold shock protein {ECO:0000313|EMBL:ENZ10495.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
cold-shock protein
L2_031_000G1_scaffold_2536_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14331..15209)
DNA (879bp) protein (293aa)
33 kDa chaperonin n=9 Tax=Clostridium RepID=G5HU24_9CLOT
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Hsp33 protein
L2_031_000G1_scaffold_2536_19
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15215..16015)
DNA (801bp) protein (267aa)
Methyltransferase n=9 Tax=Clostridium RepID=N9X254_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25391.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Methyltransferase domain.
L2_031_000G1_scaffold_2536_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16097..16606)
DNA (510bp) protein (170aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WR31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58616.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_2536_21
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16924..17097
DNA (174bp) protein (58aa)
Uncharacterized protein n=14 Tax=Clostridium RepID=N9X114_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63713.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L2_031_000G1_scaffold_2536_22
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17320..17472)
DNA (153bp) protein (51aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9VH43_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25388.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_000G1_scaffold_2536_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18063..18407)
DNA (345bp) protein (115aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VHT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58619.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_2536_24
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18782..19396)
DNA (615bp) protein (205aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9X250_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25386.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
integrase family protein
Displaying 24 items

View Taxonomy