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L2_031_000G1_scaffold_1071

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_1071_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..419)
DNA (417bp) protein (139aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ade2; Adenine deaminase 2 (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U6Y5_9FIRM
L2_031_000G1_scaffold_1071_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(439..2034)
DNA (1596bp) protein (532aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ade1; adenine deaminase Ade (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UDB0_9FIRM
L2_031_000G1_scaffold_1071_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2316..3521)
DNA (1206bp) protein (402aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glycyl-tRNA synthetase, dimeric type (EC:6.1.1.14)
Glycine--tRNA ligase n=4 Tax=Clostridiales RepID=A7B774_RUMGN
L2_031_000G1_scaffold_1071_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3611..4006)
DNA (396bp) protein (132aa)
DNA repair protein RecO n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUC9_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
DNA repair protein RecO
L2_031_000G1_scaffold_1071_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4100..4291)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66895.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_031_000G1_scaffold_1071_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4392..5291)
DNA (900bp) protein (300aa)
GTPase Era n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B776_RUMGN
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
GTP-binding protein Era
L2_031_000G1_scaffold_1071_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5322..6185)
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BNG9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49096.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted Zn-dependent peptidases, insulinase-like
L2_031_000G1_scaffold_1071_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6148..7764)
DNA (1617bp) protein (539aa)
Peptidase M16 inactive domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B777_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16322.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Predicted Zn-dependent peptidases, insulinase-like
L2_031_000G1_scaffold_1071_9
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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7810..8139
DNA (330bp) protein (110aa)
Acetyltransferase GNAT family n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TQ70_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDC75553.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
L2_031_000G1_scaffold_1071_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8359..8736)
DNA (378bp) protein (126aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B778_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16323.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Uncharacterized protein with conserved CXXC pairs
L2_031_000G1_scaffold_1071_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8739..10013)
DNA (1275bp) protein (425aa)
Thioredoxin reductase (EC:1.5.3.1)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUD3_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CCZ66899.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_031_000G1_scaffold_1071_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10000..11442)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66900.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted dehydrogenase
L2_031_000G1_scaffold_1071_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11596..13098)
DNA (1503bp) protein (501aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=2 Tax=Lachnospiraceae RepID=A7B787_RUMGN
L2_031_000G1_scaffold_1071_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13115..13693)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UDC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66902.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Glycerol-3-phosphate responsive antiterminator (mRNA-binding)
L2_031_000G1_scaffold_1071_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13844..16849)
DNA (3006bp) protein (1002aa)
bgl5; beta-glucosidase (EC:3.2.1.21)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B790_RUMGN
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EDN76352.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_031_000G1_scaffold_1071_16
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16900..18450)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0K7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30311.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Na+/melibiose symporter and related transporters
L2_031_000G1_scaffold_1071_17
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18464..20386)
DNA (1923bp) protein (641aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZS9_9FIRM
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EDM98431.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_031_000G1_scaffold_1071_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20544..21866)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66904.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_031_000G1_scaffold_1071_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21863..22573)
DNA (711bp) protein (237aa)
Response regulator receiver domain protein n=4 Tax=Clostridiales RepID=A7B792_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18954.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
two component system response regulator
L2_031_000G1_scaffold_1071_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22595..22999)
DNA (405bp) protein (135aa)
Nucleotidyltransferase substrate-binding family protein n=3 Tax=Clostridiales RepID=A5KNP2_9FIRM
Nucleotidyltransferase substrate-binding family protein {ECO:0000313|EMBL:EDK23980.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
putative nucleotidyltransferase substrate binding protein
L2_031_000G1_scaffold_1071_21
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22986..23279)
DNA (294bp) protein (98aa)
Nucleotidyltransferase domain protein n=5 Tax=Clostridiales RepID=A5KNP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25546.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Nucleotidyltransferase domain.
Displaying 21 items

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