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L2_031_000G1_scaffold_1112

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_1112_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..249)
DNA (249bp) protein (83aa)
UPI0003D5FDFE related cluster n=1 Tax=unknown RepID=UPI0003D5FDFE
Uncharacterized protein {ECO:0000313|EMBL:KJZ86482.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
arsenic resistance protein
L2_031_000G1_scaffold_1112_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(297..701)
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z635_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86836.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
protein tyrosine phosphatase
L2_031_000G1_scaffold_1112_3
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(757..1053)
DNA (297bp) protein (99aa)
Arsenite-activated ATPase ArsA {ECO:0000313|EMBL:EHI98700.1}; EC=3.6.3.16 {ECO:0000313|EMBL:EHI98700.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
arsA; arsenical pump-driving ATPase ArsA (EC:3.6.3.16)
Arsenite-activated ATPase ArsA n=1 Tax=Clostridium sp. DL-VIII RepID=G7MCX0_9CLOT
L2_031_000G1_scaffold_1112_4
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1068..2381)
DNA (1314bp) protein (438aa)
arsA; arsenical pump-driving ATPase ArsA (EC:3.6.3.16)
Arsenic transporter ATPase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FQQ3_CLOPA
Arsenic transporter ATPase {ECO:0000313|EMBL:ETD65747.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_031_000G1_scaffold_1112_5
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2374..2604)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASW5_CLOBU
arsD; arsenical resistance operon trans-acting repressor ArsD
Arsenical resistance operon trans-acting repressor ArsD {ECO:0000313|EMBL:KJZ85457.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
L2_031_000G1_scaffold_1112_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2680..2997)
DNA (318bp) protein (106aa)
UPI0003D66F16 related cluster n=1 Tax=unknown RepID=UPI0003D66F16
ArsR family transcriptional regulator {ECO:0000313|EMBL:KHD17229.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ArsR family transcriptional regulator
L2_031_000G1_scaffold_1112_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3118..3279)
DNA (162bp) protein (54aa)
Glycosyl hydrolase, family 25 n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V2N2_CLOBA
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KHD14341.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
glycosyl hydrolase family protein
L2_031_000G1_scaffold_1112_8
unknown

Not on your lists

comp(3276..3404)
DNA (129bp) protein (43aa)

This feature has no annotations

L2_031_000G1_scaffold_1112_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3417..3626)
DNA (210bp) protein (70aa)
Toxin secretion/phage lysis holin n=2 Tax=Clostridium botulinum RepID=B1QBF4_CLOBO
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:EKN41242.1}; TaxID=1232189 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CFSAN001627.;"
toxin secretion/phage lysis holin
L2_031_000G1_scaffold_1112_10
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4217..4399)
DNA (183bp) protein (61aa)
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F4Z6_CLOSG
RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:EHN13458.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
ECF subfamily RNA polymerase sigma-24 subunit
L2_031_000G1_scaffold_1112_11
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4409..4534)
DNA (126bp) protein (42aa)
Putative uncharacterized protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F4Z5_CLOSG
Putative uncharacterized protein {ECO:0000313|EMBL:EHN13457.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
L2_031_000G1_scaffold_1112_12
unknown

Not on your lists

comp(4551..4700)
DNA (150bp) protein (50aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002EE6F0D
L2_031_000G1_scaffold_1112_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4738..5832)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T120_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ52683.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_031_000G1_scaffold_1112_14
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5852..6871)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U8Z8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ52684.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_031_000G1_scaffold_1112_15
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6810..8471)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TLT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ52685.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_031_000G1_scaffold_1112_16
Dolosigranulum pigrum, Dolosigranulum, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8796..9647)
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Dolosigranulum pigrum ATCC 51524 RepID=H3NEC8_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EHR32793.1}; TaxID=883103 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Dolosigranulum.;" source="Dolosigranulum pigrum ATCC 51524.;"
methionine sulfoxide reductase A
L2_031_000G1_scaffold_1112_17
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9813..11402)
DNA (1590bp) protein (530aa)
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EDU36723.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EDU36723.1};; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;"
hsdM; type I restriction-modification system, M subunit (EC:2.1.1.72)
Type I restriction-modification system, M subunit n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T556_CLOSG
L2_031_000G1_scaffold_1112_18
Streptococcus sp. FF10, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11434..12648)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002D8D401
HsdS specificity protein of type I restriction-modification system {ECO:0000313|EMBL:CQR24368.1}; TaxID=1608583 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. FF10.;"
type I restriction modification DNA specificity domain protein
L2_031_000G1_scaffold_1112_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12753..15962)
DNA (3210bp) protein (1070aa)
Type I site-specific restriction-modification system, R n=2 Tax=Clostridium botulinum B RepID=B2TLI6_CLOBB
type I site-specific restriction-modification system, R
Type I site-specific restriction-modification system, R {ECO:0000313|EMBL:ACD22359.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_031_000G1_scaffold_1112_20
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15962..16534)
DNA (573bp) protein (191aa)
type I restriction endonuclease subunit M n=1 Tax=Clostridium tyrobutyricum RepID=UPI000371C9E0
Restriction endonuclease S subunits {ECO:0000313|EMBL:CDL90891.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
hypothetical protein
L2_031_000G1_scaffold_1112_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16822..17340)
DNA (519bp) protein (173aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=A7B5S4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45454.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_031_000G1_scaffold_1112_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17343..18515)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ56739.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_031_000G1_scaffold_1112_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19097..20263)
DNA (1167bp) protein (389aa)
RNA methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Clostridium butyricum RepID=B1R1C0_CLOBU
RNA methyltransferase {ECO:0000313|EMBL:KHD14465.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_031_000G1_scaffold_1112_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20541..20945)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V0B7_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES50951.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L2_031_000G1_scaffold_1112_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20965..21669)
DNA (705bp) protein (235aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=R0AG76_CLOBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJZ84431.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Displaying 25 items

View Taxonomy