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L2_031_000G1_scaffold_1157

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_1157_1
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(190..1992)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9VFP8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25140.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
signal transduction histidine kinase, LytS
L2_031_000G1_scaffold_1157_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1989..2741)
DNA (753bp) protein (251aa)
Two-component system response regulator n=7 Tax=Clostridium clostridioforme RepID=N9WX62_9CLOT
Two-component system response regulator {ECO:0000313|EMBL:ENZ67390.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
two component AraC family transcriptional regulator
L2_031_000G1_scaffold_1157_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3026..4393
DNA (1368bp) protein (456aa)
Oligogalacturonide ABC transporter substrate-binding protein n=6 Tax=Clostridium clostridioforme RepID=N9WPP1_9CLOT
Oligogalacturonide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ67389.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
extracellular solute-binding protein
L2_031_000G1_scaffold_1157_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4480..5379
DNA (900bp) protein (300aa)
Oligogalacturonide ABC transporter permease n=6 Tax=Clostridium clostridioforme RepID=N9X0S0_9CLOT
Oligogalacturonide ABC transporter permease {ECO:0000313|EMBL:ENZ67388.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
binding-protein-dependent transport system inner membrane protein
L2_031_000G1_scaffold_1157_5
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5389..6228
DNA (840bp) protein (280aa)
Oligogalacturonide ABC transporter permease n=8 Tax=Clostridium RepID=N9VGF4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25144.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
binding-protein-dependent transport systems inner membrane component
L2_031_000G1_scaffold_1157_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6321..6593
DNA (273bp) protein (91aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VFQ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67386.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_1157_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6726..8240
DNA (1515bp) protein (505aa)
arfA; xylosidase/arabinosidase ArfA (EC:3.2.1.37 3.2.1.55)
Glycoside hydrolase n=6 Tax=Clostridium clostridioforme RepID=N9WX67_9CLOT
Glycoside hydrolase {ECO:0000313|EMBL:ENZ67385.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_1157_8
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8300..9073)
DNA (774bp) protein (258aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Type III pantothenate kinase n=9 Tax=Clostridium RepID=G5HVS9_9CLOT
transcriptional activator, Baf family
L2_031_000G1_scaffold_1157_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9166..10125
DNA (960bp) protein (320aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase n=9 Tax=Clostridium RepID=G5HVT0_9CLOT
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:ENZ67383.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_1157_10
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10472..11449
DNA (978bp) protein (326aa)
LacI family transcriptional regulator n=8 Tax=Clostridium RepID=N9VGF9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25149.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
periplasmic binding protein/LacI transcriptional regulator
L2_031_000G1_scaffold_1157_11
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11530..12423
DNA (894bp) protein (298aa)
rbsK; ribokinase (EC:2.7.1.15)
Ribokinase n=8 Tax=Clostridium RepID=G5HVT2_9CLOT
Ribokinase {ECO:0000313|EMBL:CDF25150.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L2_031_000G1_scaffold_1157_12
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12472..12888
DNA (417bp) protein (139aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
D-ribose pyranase n=9 Tax=Clostridium RepID=G5HVT3_9CLOT
Ribose ABC transport system, high affinity permease RbsD
L2_031_000G1_scaffold_1157_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12916..14406
DNA (1491bp) protein (497aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Ribose ABC transporter ATP-binding protein n=7 Tax=Clostridium clostridioforme RepID=N9WPQ2_9CLOT
monosaccharide-transporting ATPase
L2_031_000G1_scaffold_1157_14
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14406..15347
DNA (942bp) protein (314aa)
Ribose ABC transporter permease n=9 Tax=Clostridium RepID=N9X0U4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25152.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
ribose ABC transporter permease
L2_031_000G1_scaffold_1157_15
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15416..16333
DNA (918bp) protein (306aa)
Ribose ABC transporter substrate-binding protein n=8 Tax=Clostridium RepID=N9VGG4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25153.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
periplasmic binding protein/LacI transcriptional regulator
L2_031_000G1_scaffold_1157_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16644..18248
DNA (1605bp) protein (535aa)
Peptide chain release factor 3 n=8 Tax=Clostridium clostridioforme RepID=G5HVT7_9CLOT
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
peptide chain release factor 3
L2_031_000G1_scaffold_1157_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18320..18766
DNA (447bp) protein (149aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WX77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67375.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_1157_18
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18896..20299
DNA (1404bp) protein (468aa)
Succinyl-diaminopimelate desuccinylase n=9 Tax=Clostridium RepID=N9WPQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25157.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
dipeptidase
L2_031_000G1_scaffold_1157_19
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20427..20519
DNA (93bp) protein (31aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9X0U9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25158.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L2_031_000G1_scaffold_1157_20
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20687..21754
DNA (1068bp) protein (356aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
D-methionine ABC transporter ATP-binding protein n=4 Tax=Clostridium RepID=N9ZRM5_9CLOT
ABC transporter
L2_031_000G1_scaffold_1157_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21756..22421
DNA (666bp) protein (222aa)
D-methionine ABC transporter permease n=10 Tax=Clostridium RepID=N9VFS2_9CLOT
D-methionine ABC transporter permease {ECO:0000313|EMBL:ENZ19016.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
binding-protein-dependent transport system inner membrane protein
L2_031_000G1_scaffold_1157_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22600..23508
DNA (909bp) protein (303aa)
Lipoprotein n=9 Tax=Clostridium RepID=G5HVU3_9CLOT
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
NLPA lipoprotein
L2_031_000G1_scaffold_1157_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23707..24561
DNA (855bp) protein (285aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9WPR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67369.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_1157_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24666..24938
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RHX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19093.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
YlmC/YmxH family sporulation protein
L2_031_000G1_scaffold_1157_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24967..25986)
DNA (1020bp) protein (340aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase n=6 Tax=Clostridium clostridioforme RepID=N9VGH6_9CLOT
Displaying 25 items

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