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L2_031_000G1_scaffold_1459

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_1459_1
unknown

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comp(832..951)
DNA (120bp) protein (40aa)

This feature has no annotations

L2_031_000G1_scaffold_1459_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1648..2109)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=2 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZEN0_EUBR3
hypothetical protein
Sigma-70, region 4 family protein {ECO:0000313|EMBL:EQJ62857.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_000G1_scaffold_1459_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2559..4367)
DNA (1809bp) protein (603aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDL1_9FIRM
ABC transporter permease {ECO:0000313|EMBL:KEY32204.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
ABC transporter permease
L2_031_000G1_scaffold_1459_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4364..5089)
DNA (726bp) protein (242aa)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJG8_9FIRM
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY32205.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
ABC-type antimicrobial peptide transport system, ATPase component
L2_031_000G1_scaffold_1459_5
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5119..6156)
DNA (1038bp) protein (346aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Sensor histidine kinase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CNV4_9CLOT
sensor histidine kinase
L2_031_000G1_scaffold_1459_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6165..6851)
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HL80_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:KEY29913.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
transcriptional regulator
L2_031_000G1_scaffold_1459_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6848..7042)
DNA (195bp) protein (65aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A8RVE8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13625.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_031_000G1_scaffold_1459_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7061..7285)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GWH2_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KEY29914.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L2_031_000G1_scaffold_1459_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7566..8045)
DNA (480bp) protein (160aa)
Major facilitator superfamily MFS_1 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP77_BIFLS
hypothetical protein
Enterobactin exporter EntS {ECO:0000313|EMBL:CEF14576.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L2_031_000G1_scaffold_1459_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8087..8551)
DNA (465bp) protein (155aa)
Major facilitator superfamily MFS_1 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWV3_BIFLJ
Uncharacterized protein {ECO:0000313|EMBL:KEY29915.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
major facilitator superfamily protein
L2_031_000G1_scaffold_1459_11
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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8805..9659
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4J150_BIFAP
Uncharacterized protein {ECO:0000313|EMBL:KJY63581.1}; TaxID=1684 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides.;"
hypothetical protein
L2_031_000G1_scaffold_1459_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9671..10399
DNA (729bp) protein (243aa)
ABC transporter, ATP binding protein, probably The SpdC antimicrobial peptide resistance efflux pump (EC:3.6.3.28)
ABC transporter, ATP binding protein, probably The SpdC antimicrobial peptide resistance efflux pump n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4IQV8_BIFAP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY29916.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_031_000G1_scaffold_1459_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10380..11537
DNA (1158bp) protein (386aa)
ABC transporter, permease protein, probably The SpdC antimicrobial peptide resistance efflux pump n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4ILH8_BIFAP
Uncharacterized protein {ECO:0000313|EMBL:KEY29917.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
ABC transporter, permease protein, probably The SpdC antimicrobial peptide resistance efflux pump
L2_031_000G1_scaffold_1459_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11580..12080
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4INT4_BIFAP
Uncharacterized protein {ECO:0000313|EMBL:KEY29918.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L2_031_000G1_scaffold_1459_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12136..12330)
DNA (195bp) protein (65aa)
Transposase-like protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWH0_BIFLJ
Transposase {ECO:0000313|EMBL:KEY32356.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
transposase
Displaying 15 items

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