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L2_031_000G1_scaffold_1463

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_1463_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..378)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BWR8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19225.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
small GTP-binding protein domain
L2_031_000G1_scaffold_1463_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(466..1209)
DNA (744bp) protein (248aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
Arginine ABC transporter, ATP-binding protein ArtM n=4 Tax=Clostridiales RepID=A7B507_RUMGN
Arginine transport ATP-binding protein ArtM {ECO:0000313|EMBL:CCZ67509.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_031_000G1_scaffold_1463_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1199..1885)
DNA (687bp) protein (229aa)
ABC transporter, permease protein n=4 Tax=Clostridiales RepID=A7B508_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47932.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Polar amino acid transport system permease
L2_031_000G1_scaffold_1463_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1984..2256)
DNA (273bp) protein (91aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B509_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77032.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L2_031_000G1_scaffold_1463_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2280..2501)
DNA (222bp) protein (74aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B509_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47933.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_031_000G1_scaffold_1463_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2648..3475)
DNA (828bp) protein (276aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=3 Tax=Lachnospiraceae RepID=A7B510_RUMGN
L2_031_000G1_scaffold_1463_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3486..4313)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TP50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67513.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
HAD-superfamily hydrolase, subfamily IIB
L2_031_000G1_scaffold_1463_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4457..5602
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TW48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67514.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_031_000G1_scaffold_1463_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5669..6424)
DNA (756bp) protein (252aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B513_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47937.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Phosphotransferase enzyme family.
L2_031_000G1_scaffold_1463_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6421..8250)
DNA (1830bp) protein (610aa)
acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE (EC:1.2.1.10 1.1.1.1)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U8S1_9FIRM
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_031_000G1_scaffold_1463_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8241..8648)
DNA (408bp) protein (136aa)
acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE (EC:1.2.1.10 1.1.1.1)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U8S1_9FIRM
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_031_000G1_scaffold_1463_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8800..10254)
DNA (1455bp) protein (485aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B515_RUMGN
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EDN77038.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family
L2_031_000G1_scaffold_1463_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10447..10977)
DNA (531bp) protein (177aa)
50S ribosomal protein L17 n=4 Tax=Clostridiales RepID=A7B516_RUMGN
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
LSU ribosomal protein L17P
L2_031_000G1_scaffold_1463_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11081..12040)
DNA (960bp) protein (320aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
DNA-directed RNA polymerase subunit alpha n=4 Tax=Clostridiales RepID=A7B517_RUMGN
DNA-directed RNA polymerase subunit alpha
L2_031_000G1_scaffold_1463_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12130..12723)
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=4 Tax=Clostridiales RepID=F7JY70_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
SSU ribosomal protein S4P
L2_031_000G1_scaffold_1463_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12829..13224)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=5 Tax=Clostridiales RepID=A7B519_RUMGN
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
SSU ribosomal protein S11P
L2_031_000G1_scaffold_1463_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13286..13654)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UFE2_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
30S ribosomal protein S13
L2_031_000G1_scaffold_1463_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14243..14461)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=8 Tax=Clostridiales RepID=A7B522_RUMGN
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
translation initiation factor IF-1
L2_031_000G1_scaffold_1463_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14497..14742)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TW55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67524.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_031_000G1_scaffold_1463_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14746..15390)
DNA (645bp) protein (215aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPI3_9FIRM
L2_031_000G1_scaffold_1463_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15493..16824)
DNA (1332bp) protein (444aa)
Protein translocase subunit SecY n=4 Tax=Clostridiales RepID=A7B525_RUMGN
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
protein translocase subunit secY/sec61 alpha
L2_031_000G1_scaffold_1463_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16824..17264)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=3 Tax=Clostridiales RepID=F7JY77_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
LSU ribosomal protein L15P
L2_031_000G1_scaffold_1463_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17290..17472)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=2 Tax=Lachnospiraceae RepID=F7JY78_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
LSU ribosomal protein L30P
L2_031_000G1_scaffold_1463_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17486..17995)
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=2 Tax=Lachnospiraceae RepID=F7JY79_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
SSU ribosomal protein S5P
L2_031_000G1_scaffold_1463_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18012..18380)
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=4 Tax=Clostridiales RepID=A7B529_RUMGN
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
LSU ribosomal protein L18P
L2_031_000G1_scaffold_1463_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18398..18940)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=4 Tax=Clostridiales RepID=A7B530_RUMGN
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
LSU ribosomal protein L6P
L2_031_000G1_scaffold_1463_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19139..19540)
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=4 Tax=Clostridiales RepID=A7B531_RUMGN
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Ribosomal protein S8
L2_031_000G1_scaffold_1463_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19590..19775)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=4 Tax=Clostridiales RepID=A7B532_RUMGN
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Ribosomal protein S14
L2_031_000G1_scaffold_1463_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19789..20328)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=3 Tax=Clostridiales RepID=F7JY84_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
rplE; 50S ribosomal protein L5
L2_031_000G1_scaffold_1463_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20365..20706)
DNA (342bp) protein (114aa)
50S ribosomal protein L14 n=4 Tax=Clostridiales RepID=A7B535_RUMGN
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
LSU ribosomal protein L14P
Displaying items 1-30 of 39 in total

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