ggKbase home page

L2_031_000G1_scaffold_1612

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_1612_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

104..910
DNA (807bp) protein (269aa)
Gluconate 5-dehydrogenase n=8 Tax=Clostridium RepID=N9XZP9_9CLOT
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:ENZ18402.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
short-chain dehydrogenase/reductase SDR
L2_031_000G1_scaffold_1612_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1053..1760
DNA (708bp) protein (236aa)
GntR family transcriptional regulator n=9 Tax=Clostridium RepID=N9V758_9CLOT
GntR family transcriptional regulator {ECO:0000313|EMBL:ENZ18403.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
GntR family transcriptional regulator
L2_031_000G1_scaffold_1612_3
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1801..1989)
DNA (189bp) protein (63aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9V6K1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF26426.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L2_031_000G1_scaffold_1612_4
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2147..2365
DNA (219bp) protein (73aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8RS98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98095.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Predicted transcriptional regulator
L2_031_000G1_scaffold_1612_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2551..3996
DNA (1446bp) protein (482aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Integral membrane sensor signal transduction histidine kinase n=8 Tax=Clostridium RepID=N9WDG1_9CLOT
integral membrane sensor signal transduction histidine kinase
L2_031_000G1_scaffold_1612_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4021..4842
DNA (822bp) protein (274aa)
AraC family transcriptional regulator n=9 Tax=Clostridium RepID=N9WRN0_9CLOT
AraC family transcriptional regulator {ECO:0000313|EMBL:ENZ18407.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
two component transcriptional regulator, AraC family
L2_031_000G1_scaffold_1612_7
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5185..6234
DNA (1050bp) protein (350aa)
DctP family TRAP transporter solute receptor n=8 Tax=Clostridium RepID=N9V760_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF26430.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
dctP; putative TRAP C4-dicarboxylate transport system DctP subunit
L2_031_000G1_scaffold_1612_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6218..6721
DNA (504bp) protein (168aa)
TRAP C4-dicarboxylate transport system DctQ subunit n=9 Tax=Clostridium RepID=N9V6K6_9CLOT
TRAP C4-dicarboxylate transport system DctQ subunit {ECO:0000313|EMBL:ENZ60498.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
dctQ; putative TRAP C4-dicarboxylate transport system DctQ subunit
L2_031_000G1_scaffold_1612_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6718..8025
DNA (1308bp) protein (436aa)
TRAP transporter, DctM subunit n=8 Tax=Clostridium clostridioforme RepID=N9WE08_9CLOT
TRAP transporter, DctM subunit {ECO:0000313|EMBL:ENZ18410.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
dctM; putative TRAP C4-dicarboxylate transport system permease
L2_031_000G1_scaffold_1612_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8342..9253
DNA (912bp) protein (304aa)
Auxin efflux carrier protein n=9 Tax=Clostridium RepID=N9WDG6_9CLOT
Auxin efflux carrier protein {ECO:0000313|EMBL:ENZ60496.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
auxin efflux carrier family protein
L2_031_000G1_scaffold_1612_11
unknown

Not on your lists

9340..9687
DNA (348bp) protein (116aa)

This feature has no annotations

L2_031_000G1_scaffold_1612_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9704..10375)
DNA (672bp) protein (224aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WRN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60495.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
putative GntR family transcriptional regulator
L2_031_000G1_scaffold_1612_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10695..11762
DNA (1068bp) protein (356aa)
TAXI family TRAP transporter solute receptor n=9 Tax=Clostridium RepID=N9V765_9CLOT
TAXI family TRAP transporter solute receptor {ECO:0000313|EMBL:ENZ60494.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
TRAP transporter solute receptor, TAXI family
L2_031_000G1_scaffold_1612_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11793..13739
DNA (1947bp) protein (649aa)
TRAP transporter, 4TM/12TM fusion protein n=9 Tax=Clostridium RepID=N9V6L0_9CLOT
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:ENZ18414.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
TRAP transporter, 4TM/12TM fusion protein
L2_031_000G1_scaffold_1612_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13739..14953
DNA (1215bp) protein (405aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WE13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60492.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_000G1_scaffold_1612_16
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14955..15782
DNA (828bp) protein (276aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WDH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF26438.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
signal transduction protein
L2_031_000G1_scaffold_1612_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15779..17152
DNA (1374bp) protein (458aa)
Divalent anion:Na+ symporter (DASS) family transporter n=9 Tax=Clostridium RepID=N9WRN6_9CLOT
Divalent anion:Na+ symporter (DASS) family transporter {ECO:0000313|EMBL:ENZ60490.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
anion transporter
L2_031_000G1_scaffold_1612_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17633..17911
DNA (279bp) protein (93aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WE19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ18420.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
transposase IS3/IS911 family protein
L2_031_000G1_scaffold_1612_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17941..18216
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XSQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ18421.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
transposase IS3/IS911 family protein
L2_031_000G1_scaffold_1612_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18329..18787
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XSQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ18421.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
transposase IS3/IS911 family protein
L2_031_000G1_scaffold_1612_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18839..19396
DNA (558bp) protein (186aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WRN9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60485.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ATPase AAA
L2_031_000G1_scaffold_1612_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19409..19729
DNA (321bp) protein (107aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9V770_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60484.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_000G1_scaffold_1612_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19911..20117)
DNA (207bp) protein (69aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9V6L8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ60483.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
RNA-directed DNA polymerase
Displaying 23 items

View Taxonomy