ggKbase home page

L2_031_000G1_scaffold_1860

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_1860_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..530)
DNA (528bp) protein (176aa)
Phosphoglycerate dehydrogenase n=11 Tax=Bifidobacterium RepID=B3DPQ2_BIFLD
serA1; sera1
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ACD97496.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_031_000G1_scaffold_1860_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

833..2182
DNA (1350bp) protein (450aa)
Major facilitator superfamily MFS_1 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPU1_BIFLS
Major facilitator transporter {ECO:0000313|EMBL:KEY26179.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
major facilitator superfamily protein
L2_031_000G1_scaffold_1860_3
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2392..3414)
DNA (1023bp) protein (341aa)
ABC-type ribose/xylose/arabinose/galactoside transport systems permease component n=16 Tax=Bifidobacterium RepID=B3DPQ0_BIFLD
sugar ABC transporter permease
Probable ABC transporter permease protein for sugars {ECO:0000313|EMBL:CCY95149.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_031_000G1_scaffold_1860_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3411..4481)
DNA (1071bp) protein (357aa)
ABC-type ribose/xylose/arabinose/galactoside transport systems permease component n=2 Tax=Bifidobacterium longum RepID=B3DPP9_BIFLD
araH1; arah1
ABC-type ribose/xylose/arabinose/galactoside transport systems permease component {ECO:0000313|EMBL:ACD97493.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_031_000G1_scaffold_1860_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4483..6024)
DNA (1542bp) protein (514aa)
ABC-type sugar transport system ATPase component n=19 Tax=Bifidobacterium RepID=B3DPP8_BIFLD
sugar ABC transporter ATP-binding protein
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY21688.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_031_000G1_scaffold_1860_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6165..7148)
DNA (984bp) protein (328aa)
ABC-type sugar transport system periplasmic component n=6 Tax=Bifidobacterium RepID=B3DPP7_BIFLD
rbsB; rbsb
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEY33607.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_031_000G1_scaffold_1860_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7464..9194)
DNA (1731bp) protein (577aa)
Lipoprotein LpqB n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R131_BIFLM
hypothetical protein
Lipoprotein LpqB {ECO:0000256|HAMAP-Rule:MF_01373}; Flags: Precursor;; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_031_000G1_scaffold_1860_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9191..10888)
DNA (1698bp) protein (566aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Signal transduction histidine kinase n=9 Tax=Bifidobacterium RepID=D6DBF5_BIFLN
two-component sensor kinase
L2_031_000G1_scaffold_1860_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10885..11607)
DNA (723bp) protein (241aa)
Response regulator n=12 Tax=Bifidobacterium RepID=E4R129_BIFLM
two-component response regulator
Transcriptional regulator {ECO:0000313|EMBL:KEY33605.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_031_000G1_scaffold_1860_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11665..11898)
DNA (234bp) protein (78aa)
Putative ATPase n=1 Tax=Bifidobacterium longum E18 RepID=V6XXQ3_BIFLN
recombination factor protein RarA
Recombination factor protein RarA {ECO:0000313|EMBL:BAJ67087.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Displaying 10 items

View Taxonomy