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L2_031_030G1_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_40_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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319..738
DNA (420bp) protein (140aa)
MarR-family transcriptional regulator n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UWH7_CLOBO
MarR-family transcriptional regulator {ECO:0000313|EMBL:EES48858.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
MarR-family transcriptional regulator
L2_031_030G1_scaffold_40_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

738..2198
DNA (1461bp) protein (487aa)
MDR-type permease n=2 Tax=Clostridium butyricum RepID=B1QUV3_CLOBU
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EEP56055.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
MDR-type permease
L2_031_030G1_scaffold_40_3
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2584..3246)
DNA (663bp) protein (221aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MQM2_9CLOT
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AGF58488.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_031_030G1_scaffold_40_4
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3269..4438)
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002DA236F
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ABR35981.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_031_030G1_scaffold_40_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4830..6104
DNA (1275bp) protein (425aa)
RND family efflux transporter, MFP subunit n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TX85_9CLOT
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EKQ52216.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
RND family efflux transporter MFP subunit
L2_031_030G1_scaffold_40_6
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6116..9202
DNA (3087bp) protein (1029aa)
Acriflavin resistance protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LWA4_CLOB8
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ABR34634.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_031_030G1_scaffold_40_7
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9297..10196)
DNA (900bp) protein (300aa)
transcriptional regulator n=1 Tax=Paenibacillus elgii RepID=UPI000248D420
Transcriptional regulator {ECO:0000313|EMBL:KEQ23556.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
transcriptional regulator
L2_031_030G1_scaffold_40_8
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10340..11308
DNA (969bp) protein (323aa)
ABC transporter ATP-binding protein n=2 Tax=Bacillus cereus RepID=R8KF77_BACCE
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOP08406.1}; TaxID=1053178 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG2O-3.;"
ABC transporter ATP-binding protein
L2_031_030G1_scaffold_40_9
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11327..12358
DNA (1032bp) protein (344aa)
ABC transporter substrate-binding protein n=1 Tax=Paenibacillus sp. JC66 RepID=UPI00028A2F56
Uncharacterized protein {ECO:0000313|EMBL:EJQ43305.1}; TaxID=1053189 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG5X1-1.;"
ABC transporter, substrate-binding protein, putative
L2_031_030G1_scaffold_40_10
Paenibacillus odorifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12391..14064
DNA (1674bp) protein (558aa)
ABC transporter permease n=1 Tax=Paenibacillus elgii RepID=UPI000248D41D
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIQ76639.1}; TaxID=189426 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus odorifer.;"
L2_031_030G1_scaffold_40_11
Viridibacillus arenosi, Viridibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14086..15216
DNA (1131bp) protein (377aa)
Uncharacterized protein n=3 Tax=Bacillus cereus RepID=R8KG99_BACCE
Metallo-beta-lactamase {ECO:0000313|EMBL:ETT88069.1}; TaxID=1227360 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Viridibacillus.;" source="Viridibacillus arenosi FSL R5-213.;"
metallo-beta-lactamase family protein
L2_031_030G1_scaffold_40_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15697..16389
DNA (693bp) protein (231aa)
CRISPR-associated protein Cas6 n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBP1_CLOBU
CRISPR-associated protein Cas6 {ECO:0000313|EMBL:EEP56131.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
cas6; CRISPR-associated protein Cas6
L2_031_030G1_scaffold_40_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16404..18152
DNA (1749bp) protein (583aa)
UPI0003D59DF0 related cluster n=1 Tax=unknown RepID=UPI0003D59DF0
Crispr-associated protein, Csh1 family {ECO:0000313|EMBL:EEP56084.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
csh; crispr-associated protein, Csh1 family
L2_031_030G1_scaffold_40_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18154..19104
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBN9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP56248.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_031_030G1_scaffold_40_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19108..19899
DNA (792bp) protein (264aa)
UPI0003D61BD6 related cluster n=1 Tax=unknown RepID=UPI0003D61BD6
CRISPR-associated protein Cas5 {ECO:0000313|EMBL:ETI90106.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
cas5; cas5h: CRISPR-associated protein Cas5
L2_031_030G1_scaffold_40_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20007..22628
DNA (2622bp) protein (874aa)
Crispr-associated helicase Cas3 n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBN7_CLOBU
Crispr-associated helicase Cas3 {ECO:0000313|EMBL:EEP56399.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
cas3; crispr-associated helicase Cas3
L2_031_030G1_scaffold_40_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22765..23220
DNA (456bp) protein (152aa)
UPI0003D5C07A related cluster n=1 Tax=unknown RepID=UPI0003D5C07A
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:ETI90108.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
cas4; CRISPR-associated protein Cas4
L2_031_030G1_scaffold_40_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23387..24235
DNA (849bp) protein (283aa)
cas1-2: CRISPR-associated endonuclease Cas1 2 (EC:3.1.-.-)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVL8_CLOSA
L2_031_030G1_scaffold_40_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24235..24525
DNA (291bp) protein (97aa)
cas2; CRISPR-associated endoribonuclease Cas2 (EC:3.1.-.-)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MV05_CLOSA
L2_031_030G1_scaffold_40_20
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25211..25690
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34874.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Amidases related to nicotinamidase
L2_031_030G1_scaffold_40_21
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25761..26888
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JKV0_CLOBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA69286.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L2_031_030G1_scaffold_40_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27101..27991
DNA (891bp) protein (297aa)
Phage replisome organizer, putative n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UZQ6_CLOBO
Phage replisome organizer, putative {ECO:0000313|EMBL:EES47778.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
phage replisome organizer, putative
L2_031_030G1_scaffold_40_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28062..29123
DNA (1062bp) protein (354aa)
3-dehydroquinate synthase n=2 Tax=Clostridium butyricum RepID=B1QW98_CLOBU
3-dehydroquinate synthase {ECO:0000313|EMBL:EEP55998.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
3-dehydroquinate synthase
L2_031_030G1_scaffold_40_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29318..29725
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JFC4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32329.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_031_030G1_scaffold_40_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29903..30661
DNA (759bp) protein (253aa)
Putative phage replisome organizer n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXB0_CLOSA
putative phage replisome organizer
Putative phage replisome organizer {ECO:0000313|EMBL:AGX45183.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_030G1_scaffold_40_26
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30747..32756)
DNA (2010bp) protein (670aa)
Glycosyl transferase family 39 n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U8J7_ETHHY
glycosyl transferase family protein
Glycosyl transferase family 39 {ECO:0000313|EMBL:ADU25988.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L2_031_030G1_scaffold_40_27
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33125..34348
DNA (1224bp) protein (408aa)
Nuclease SbcCD, D subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZP1_9CLOT
Nuclease SbcCD, D subunit {ECO:0000313|EMBL:EHI98210.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
sbcD; nuclease SbcCD subunit D
L2_031_030G1_scaffold_40_28
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34335..37820
DNA (3486bp) protein (1162aa)
Chromosome segregation protein SMC n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FX44_CLOPA
Chromosome segregation protein SMC {ECO:0000313|EMBL:ETD68441.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
SMC domain-containing protein
L2_031_030G1_scaffold_40_29
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

38470..40518
DNA (2049bp) protein (683aa)
Alpha-xylosidase {ECO:0000313|EMBL:EKQ16571.1}; EC=3.2.1.- {ECO:0000313|EMBL:EKQ16571.1};; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Alpha-xylosidase n=1 Tax=Lactobacillus casei A2-362 RepID=K6R786_LACCA
glycoside hydrolase
L2_031_030G1_scaffold_40_30
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40559..40975
DNA (417bp) protein (139aa)
PTS system fructose IIA component n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EGM0_9FIRM
PTS system fructose IIA component {ECO:0000313|EMBL:EEQ57355.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
phosphotransferase system, mannose/fructose-specific component IIA
Displaying items 1-30 of 95 in total

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