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L2_031_030G1_scaffold_52

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_52_1
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1..258
DNA (258bp) protein (86aa)
Site-specific recombinase, phage integrase family n=3 Tax=Firmicutes RepID=E4LNI2_9CLOT
Integrase {ECO:0000313|EMBL:EPR45089.1}; TaxID=1327994 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis 10244.;"
site-specific recombinase, phage integrase family
L2_031_030G1_scaffold_52_2
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(722..847)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LNI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR39626.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_031_030G1_scaffold_52_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2359..3987
DNA (1629bp) protein (543aa)
LPXTG-motif cell wall anchor domain protein n=3 Tax=Firmicutes RepID=E4LNI4_9CLOT
Fimbrial isopeptide formation D2 domain protein {ECO:0000313|EMBL:EQJ62762.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_030G1_scaffold_52_4
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3995..4819
DNA (825bp) protein (275aa)
Sortase family protein n=2 Tax=Clostridiales RepID=E4LNI5_9CLOT
Sortase family protein {ECO:0000313|EMBL:EFR39622.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_031_030G1_scaffold_52_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4816..5649
DNA (834bp) protein (278aa)
Sortase family protein {ECO:0000313|EMBL:EQJ63728.1}; EC=3.4.22.- {ECO:0000313|EMBL:EQJ63728.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Sortase family protein n=4 Tax=Firmicutes RepID=E4LNI6_9CLOT
LPXTG-site transpeptidase (sortase) family protein
L2_031_030G1_scaffold_52_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6017..10252
DNA (4236bp) protein (1412aa)
LPXTG-motif cell wall anchor domain protein n=2 Tax=Clostridiales RepID=E4LNI7_9CLOT
LPXTG cell wall anchor domain protein {ECO:0000313|EMBL:EQJ63729.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_030G1_scaffold_52_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10665..11117
DNA (453bp) protein (151aa)
IS801, transposase family protein n=2 Tax=Clostridiales RepID=E4LNI8_9CLOT
Transposase family protein {ECO:0000313|EMBL:EQJ63730.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
transposase
L2_031_030G1_scaffold_52_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12245..12889
DNA (645bp) protein (215aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AW23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGJ52909.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L2_031_030G1_scaffold_52_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12886..13767
DNA (882bp) protein (294aa)
Xylose isomerase-like TIM barrel family protein n=1 Tax=Clostridium difficile P28 RepID=T4P7P8_CLODI
Xylose isomerase-like TIM barrel family protein {ECO:0000313|EMBL:EQJ63734.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
sugar phosphate isomerase/epimerase
L2_031_030G1_scaffold_52_10
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13798..16590
DNA (2793bp) protein (931aa)
Sigma-54 interaction domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LNJ3_9CLOT
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EFR39579.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
PTS system transcriptional activator
L2_031_030G1_scaffold_52_11
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16700..17137
DNA (438bp) protein (146aa)
PTS system, mannose/fructose/sorbose family, IIA component n=4 Tax=Firmicutes RepID=H1AW26_9FIRM
PTS system mannose/fructose/sorbose family IIA component {ECO:0000313|EMBL:CDC81847.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
PTS system, IIa component
L2_031_030G1_scaffold_52_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17127..17609
DNA (483bp) protein (161aa)
Fructose-specific phosphotransferase enzyme IIB component n=4 Tax=Firmicutes RepID=E4LNJ6_9CLOT
PTS system sorbose subIIB component family protein {ECO:0000313|EMBL:EQJ63737.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS sugar transporter
L2_031_030G1_scaffold_52_13
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17626..18402
DNA (777bp) protein (259aa)
PTS system sorbose-specific iic component n=1 Tax=Clostridium sp. HGF2 RepID=E4LNJ7_9CLOT
PTS system sorbose-specific iic component {ECO:0000313|EMBL:EFR39635.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
PTS sorbose-specific transporter subunit IIC
L2_031_030G1_scaffold_52_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18399..19217
DNA (819bp) protein (273aa)
PTS system mannose/fructose/sorbose family IID component n=3 Tax=Firmicutes RepID=E4LNJ8_9CLOT
PTS system mannose/fructose/sorbose IID component family protein {ECO:0000313|EMBL:EQJ63739.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L2_031_030G1_scaffold_52_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19565..21247)
DNA (1683bp) protein (561aa)
Diguanylate cyclase (GGDEF) domain protein n=4 Tax=Firmicutes RepID=E4LNJ9_9CLOT
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQJ63740.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
diguanylate cyclase (GGDEF) domain
L2_031_030G1_scaffold_52_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21493..22290)
DNA (798bp) protein (266aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EQJ63741.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EQJ63741.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=3 Tax=Firmicutes RepID=H1B7X2_9FIRM
L2_031_030G1_scaffold_52_17
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22293..22931)
DNA (639bp) protein (213aa)
HAD hydrolase, family IA, variant 3 n=4 Tax=Firmicutes RepID=E4LNK1_9CLOT
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EFR39583.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
L2_031_030G1_scaffold_52_18
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23321..24820
DNA (1500bp) protein (500aa)
ypwA; Putative metalloprotease YpwA (EC:3.4.24.-)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AW33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29622.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_031_030G1_scaffold_52_19
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25208..26632)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1AW34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29623.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
glycoside hydrolase
L2_031_030G1_scaffold_52_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26711..27379)
DNA (669bp) protein (223aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LNK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ63745.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_030G1_scaffold_52_21
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27376..28188)
DNA (813bp) protein (271aa)
Cof-like hydrolase n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B7X7_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EHO29625.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Predicted hydrolases of the HAD superfamily
L2_031_030G1_scaffold_52_22
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28219..29592)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B7X8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29626.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L2_031_030G1_scaffold_52_23
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29649..31091)
DNA (1443bp) protein (481aa)
MlrC domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LNK8_9CLOT
MlrC domain protein {ECO:0000313|EMBL:EFR39516.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
microcystin LR degradation protein MlrC-like protein
L2_031_030G1_scaffold_52_24
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31139..32578)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6U7X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC81813.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
microcystin LR degradation protein MlrC-like protein
L2_031_030G1_scaffold_52_25
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32669..34054)
DNA (1386bp) protein (462aa)
Protein-N(pi)-phosphohistidine--sugar phosphotransferase (EC:2.7.1.69)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B7Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29629.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_031_030G1_scaffold_52_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34395..35234)
DNA (840bp) protein (280aa)
PRD domain protein n=1 Tax=Clostridium difficile P28 RepID=T4P809_CLODI
PRD domain protein {ECO:0000313|EMBL:EQJ63752.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
licT; BigG family transcription antiterminator
L2_031_030G1_scaffold_52_27
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(35247..35687)
DNA (441bp) protein (147aa)
PTS system, glucose subfamily, IIA component n=7 Tax=Firmicutes RepID=E4LNL2_9CLOT
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:ENY86345.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system glucose-specific transporter subunit IIABC
L2_031_030G1_scaffold_52_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36384..37301
DNA (918bp) protein (306aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LNL4_9CLOT
Tocopherol cyclase family protein {ECO:0000313|EMBL:EQJ63755.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_030G1_scaffold_52_29
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37419..38306)
DNA (888bp) protein (296aa)
PHP domain protein {ECO:0000313|EMBL:EFR39610.1}; EC=3.1.3.- {ECO:0000313|EMBL:EFR39610.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
PHP domain protein n=2 Tax=Clostridiales RepID=E4LNL5_9CLOT
putative metal-dependent phosphoesterase
L2_031_030G1_scaffold_52_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38303..39319)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LNL6_9CLOT
ROK family protein {ECO:0000313|EMBL:EQJ63757.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
transcriptional regulator/sugar kinase
Displaying items 1-30 of 57 in total

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