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L2_031_030G1_scaffold_60

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Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_60_1
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(124..1476)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RVA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74910.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L2_031_030G1_scaffold_60_2
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1703..2608
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ALE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86308.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ABC transporter permease
L2_031_030G1_scaffold_60_3
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2620..3900
DNA (1281bp) protein (427aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=S2YLM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86307.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L2_031_030G1_scaffold_60_4
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3924..5168
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ALE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86306.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
beta-glucanase
L2_031_030G1_scaffold_60_5
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5188..6474
DNA (1287bp) protein (429aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ALS8_9FIRM
Oxidoreductase {ECO:0000313|EMBL:KEZ88257.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
oxidoreductase domain-containing protein
L2_031_030G1_scaffold_60_6
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6480..8117
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RV96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74906.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L2_031_030G1_scaffold_60_7
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8182..8760
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WV96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06485.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L2_031_030G1_scaffold_60_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8879..10171
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UGJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45822.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_031_030G1_scaffold_60_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10173..11447)
DNA (1275bp) protein (425aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U9S5_9FIRM
L2_031_030G1_scaffold_60_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11579..12250
DNA (672bp) protein (224aa)
Response regulator receiver domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQF5_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCZ67920.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_031_030G1_scaffold_60_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12250..13614
DNA (1365bp) protein (455aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TX55_9FIRM
Sensor protein basS/pmrB
L2_031_030G1_scaffold_60_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13705..14301
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BQY6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45818.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_031_030G1_scaffold_60_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14320..14793
DNA (474bp) protein (158aa)
Hydrolase, NUDIX family n=4 Tax=Clostridiales RepID=A7B3W0_RUMGN
Hydrolase NUDIX family {ECO:0000313|EMBL:CCZ67917.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Isopentenyldiphosphate isomerase
L2_031_030G1_scaffold_60_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14790..15446)
DNA (657bp) protein (219aa)
Channel protein, hemolysin III family n=4 Tax=Clostridiales RepID=A7B3V9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17486.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
channel protein, hemolysin III family
L2_031_030G1_scaffold_60_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15669..17252
DNA (1584bp) protein (528aa)
DEAD/DEAH box helicase n=4 Tax=Clostridiales RepID=A7B3V8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17487.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Superfamily II DNA and RNA helicases
L2_031_030G1_scaffold_60_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17349..17963
DNA (615bp) protein (205aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B3V7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77325.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_031_030G1_scaffold_60_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(18022..20268)
DNA (2247bp) protein (749aa)
lacZ1; beta-galactosidase LacZ (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S6B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42207.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_031_030G1_scaffold_60_18
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20288..21694)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EB57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97095.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
sugar/sodium symporter
L2_031_030G1_scaffold_60_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(21772..22758)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S6B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42212.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_031_030G1_scaffold_60_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22879..23811)
DNA (933bp) protein (311aa)
Carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=4 Tax=Clostridiales RepID=F7JZF2_9FIRM
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_031_030G1_scaffold_60_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23903..25471)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UGI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67912.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted integral membrane protein
L2_031_030G1_scaffold_60_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25622..27361
DNA (1740bp) protein (580aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BSQ7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45811.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC transporter
L2_031_030G1_scaffold_60_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27354..29096
DNA (1743bp) protein (581aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZT5_RUMGN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN78946.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ABC transporter ATP-binding protein/permease
L2_031_030G1_scaffold_60_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29114..29500)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZT4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78945.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_031_030G1_scaffold_60_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29685..30467
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQ52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67908.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC transporter
L2_031_030G1_scaffold_60_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30460..31659
DNA (1200bp) protein (400aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BRS1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45807.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-2 type transporter
L2_031_030G1_scaffold_60_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31852..32040
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZT0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78941.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_031_030G1_scaffold_60_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32102..32551
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=3 Tax=Clostridiales RepID=F7JZE5_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
transcriptional regulator NrdR
L2_031_030G1_scaffold_60_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32556..33290
DNA (735bp) protein (245aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=3 Tax=Clostridiales RepID=F7JZE4_9FIRM
L2_031_030G1_scaffold_60_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33356..34108
DNA (753bp) protein (251aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease n=3 Tax=Clostridiales RepID=F7JZE3_9FIRM
Exodeoxyribonuclease III {ECO:0000313|EMBL:ETD17498.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Displaying items 1-30 of 73 in total

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