ggKbase home page

L2_031_030G1_scaffold_120

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_120_1
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

514..1851
DNA (1338bp) protein (446aa)
Transporter YeeO n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT25_CLOSA
yeeO; transporter YeeO
Transporter YeeO {ECO:0000313|EMBL:AGX43750.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_030G1_scaffold_120_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1986..2471)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY29384.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative membrane protein
L2_031_030G1_scaffold_120_3
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2597..3514)
DNA (918bp) protein (306aa)
ycsN; oxidoreductase YcsN (EC:1.-.-.-)
Aldo/keto reductase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M4M6_9CLOT
Aldo/keto reductase {ECO:0000313|EMBL:EHJ01601.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
L2_031_030G1_scaffold_120_4
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4007..4528
DNA (522bp) protein (174aa)
putative NADH dehydrogenase/NAD(P)H nitroreductase (EC:1.-.-.-)
Putative NADH dehydrogenase/NAD(P)H nitroreductase {ECO:0000313|EMBL:AGX41869.1}; EC=1.-.-.- {ECO:0000313|EMBL:AGX41869.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Putative NADH dehydrogenase/NAD(P)H nitroreductase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MM58_CLOSA
L2_031_030G1_scaffold_120_5
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4942..6474)
DNA (1533bp) protein (511aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium sp. DL-VIII RepID=G7M4G2_9CLOT
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EHJ01303.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_031_030G1_scaffold_120_6
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6653..7663
DNA (1011bp) protein (337aa)
Beta-ketoacyl-acyl-carrier-protein synthase I {ECO:0000313|EMBL:EHJ01406.1}; EC=2.3.1.41 {ECO:0000313|EMBL:EHJ01406.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
fabH2; 3-oxoacyl-ACP synthase (EC:2.3.1.180)
Beta-ketoacyl-acyl-carrier-protein synthase I n=1 Tax=Clostridium sp. DL-VIII RepID=G7M8S1_9CLOT
L2_031_030G1_scaffold_120_7
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7773..9062)
DNA (1290bp) protein (430aa)
phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
Phenylacetate--CoA ligase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SMG8_CLOC7
L2_031_030G1_scaffold_120_8
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9308..10162)
DNA (855bp) protein (285aa)
RpiR family transcriptional regulator n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EMJ3_CLOPA
RpiR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EKQ55530.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_031_030G1_scaffold_120_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10208..11176)
DNA (969bp) protein (323aa)
Putative dehydrogenase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAL7_9CLOT
Putative dehydrogenase {ECO:0000313|EMBL:EKQ55529.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
oxidoreductase domain-containing protein
L2_031_030G1_scaffold_120_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11224..11892)
DNA (669bp) protein (223aa)
Ribose-5-phosphate isomerase {ECO:0000256|SAAS:SAAS00087684}; EC=5.3.1.6 {ECO:0000256|SAAS:SAAS00087684};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Ribose 5-phosphate isomerase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FR52_CLOPA
ribose 5-phosphate isomerase
L2_031_030G1_scaffold_120_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12111..12968)
DNA (858bp) protein (286aa)
DegV family protein n=2 Tax=Clostridium botulinum E RepID=B2UX31_CLOBA
DegV family protein
DegV family protein {ECO:0000313|EMBL:EES51256.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L2_031_030G1_scaffold_120_12
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13118..15391)
DNA (2274bp) protein (758aa)
helD1; helicase IV (EC:3.6.4.12)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Helicase IV n=2 Tax=Clostridium saccharoperbutylacetonicum RepID=M1MRH8_9CLOT
L2_031_030G1_scaffold_120_13
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15768..16811
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6DNH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA79432.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
peptidase S58 DmpA
L2_031_030G1_scaffold_120_14
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16857..17216
DNA (360bp) protein (120aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Methylglyoxal synthase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=MGSA_CLOB8
methylglyoxal synthase
L2_031_030G1_scaffold_120_15
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17330..18133)
DNA (804bp) protein (268aa)
Aminoglycoside 3-N-acetyltransferase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DAA0_9FIRM
Aminoglycoside 3-N-acetyltransferase {ECO:0000313|EMBL:ERI93710.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
aminoglycoside phosphotransferase
L2_031_030G1_scaffold_120_16
unknown

Not on your lists

comp(18226..18321)
DNA (96bp) protein (32aa)

This feature has no annotations

L2_031_030G1_scaffold_120_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18507..19745)
DNA (1239bp) protein (413aa)
Aminotransferase n=2 Tax=Clostridium butyricum RepID=B1QUB1_CLOBU
Aminotransferase, class I and II {ECO:0000313|EMBL:EEP54324.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
aminotransferase
L2_031_030G1_scaffold_120_18
unknown

Not on your lists

19810..19935
DNA (126bp) protein (42aa)

This feature has no annotations

L2_031_030G1_scaffold_120_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19916..21298
DNA (1383bp) protein (461aa)
GntR-family transcriptioanl regulator n=2 Tax=Clostridium butyricum RepID=B1QUB2_CLOBU
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEP54505.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
transcriptional regulator, GntR family with aminotransferase domain containing protein
L2_031_030G1_scaffold_120_20
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21399..21629)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FS71_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:AJH00999.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L2_031_030G1_scaffold_120_21
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21736..23112)
DNA (1377bp) protein (459aa)
Citrate synthase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FZJ8_9CLOT
citrate synthase
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000313|EMBL:CDM67588.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_031_030G1_scaffold_120_22
Gossypium raimondii, Gossypium, Malvales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(23292..23843)
DNA (552bp) protein (184aa)
Conserved protein n=1 Tax=Saccharomyces cerevisiae (strain YJM789) RepID=A6ZL92_YEAS7
Uncharacterized protein {ECO:0000313|EMBL:KJB18097.1}; TaxID=29730 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.;" source="Gossypium raimondii (New World cotton).;"
hypothetical protein
L2_031_030G1_scaffold_120_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24062..24571)
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TKD7_CLOBB
Uncharacterized protein {ECO:0000313|EMBL:AIY81970.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
L2_031_030G1_scaffold_120_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24625..24741)
DNA (117bp) protein (39aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UZ06_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:ETI91083.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L2_031_030G1_scaffold_120_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25027..26508)
DNA (1482bp) protein (494aa)
Transporter n=2 Tax=Clostridium butyricum RepID=B1QZP9_CLOBU
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
sodium/proline symporter
L2_031_030G1_scaffold_120_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26768..28186)
DNA (1419bp) protein (473aa)
arginine decarboxylase (EC:4.1.1.19)
Arginine decarboxylase {ECO:0000313|EMBL:AGX44838.1}; EC=4.1.1.19 {ECO:0000313|EMBL:AGX44838.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Arginine decarboxylase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWB1_CLOSA
L2_031_030G1_scaffold_120_27
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28217..29482)
DNA (1266bp) protein (422aa)
Peptidase M16 domain protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M6S5_9CLOT
Peptidase M16 domain protein {ECO:0000313|EMBL:EHJ01373.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
zinc protease
L2_031_030G1_scaffold_120_28
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30027..31382)
DNA (1356bp) protein (452aa)
Radical SAM domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K3I9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ89115.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
radical SAM domain protein
L2_031_030G1_scaffold_120_29
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31848..33794)
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J6J4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT22671.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
Histidine kinase, HAMP region:chemotaxis sensory transducer precursor
L2_031_030G1_scaffold_120_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34053..35987)
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABA9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33668.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
htpG; chaperone protein HtpG
Displaying items 1-30 of 56 in total

View Taxonomy