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L2_031_030G1_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_122_1
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(81..941)
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VPA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGJ54209.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
L2_031_030G1_scaffold_122_2
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1008..1769)
DNA (762bp) protein (254aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LW54_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32072.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_031_030G1_scaffold_122_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1965..2453
DNA (489bp) protein (163aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=5 Tax=Firmicutes RepID=E4LW53_9CLOT
L2_031_030G1_scaffold_122_4
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2570..2977
DNA (408bp) protein (136aa)
Transcriptional regulator, Fur family n=7 Tax=Firmicutes RepID=E4LW52_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88346.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Fur family ferric uptake regulator
L2_031_030G1_scaffold_122_5
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3014..3553
DNA (540bp) protein (180aa)
Rubrerythrin n=7 Tax=Firmicutes RepID=E4LW51_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88345.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Rubrerythrin
L2_031_030G1_scaffold_122_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3938..4669
DNA (732bp) protein (244aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=7 Tax=Firmicutes RepID=E4LW50_9CLOT
L2_031_030G1_scaffold_122_7
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5374..6204
DNA (831bp) protein (277aa)
PTS system IIC component n=1 Tax=Erysipelotrichaceae bacterium CAG:64 RepID=R6UHI8_9FIRM
PTS system IIC component {ECO:0000313|EMBL:CDC85233.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L2_031_030G1_scaffold_122_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6206..7096
DNA (891bp) protein (297aa)
PTS system mannose/fructose/sorbose family IID component n=7 Tax=Firmicutes RepID=E4LW48_9CLOT
PTS system mannose/fructose/sorbose IID component family protein {ECO:0000313|EMBL:EQJ59473.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system IID component, Man family (TC 4.A.6)
L2_031_030G1_scaffold_122_9
unknown

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comp(7032..7214)
DNA (183bp) protein (61aa)

This feature has no annotations

L2_031_030G1_scaffold_122_10
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7443..8240)
DNA (798bp) protein (266aa)
Transcriptional regulator, DeoR family n=5 Tax=Firmicutes RepID=E4LW45_9CLOT
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EFR36998.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
DeoR family transcriptional regulator
L2_031_030G1_scaffold_122_11
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8554..10434)
DNA (1881bp) protein (627aa)
PRD domain protein n=2 Tax=Firmicutes RepID=E4LW44_9CLOT
PRD domain protein {ECO:0000313|EMBL:EFR37013.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
conserved protein of unknown function
L2_031_030G1_scaffold_122_12
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10625..10945
DNA (321bp) protein (107aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=2 Tax=Firmicutes RepID=E4LW43_9CLOT
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EFR37107.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
PTS system protein
L2_031_030G1_scaffold_122_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10950..12191
DNA (1242bp) protein (414aa)
PTS system, lactose/cellobiose family IIC component n=3 Tax=Firmicutes RepID=H1AY12_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
celB.3; PTS system cellobiose-specific transporter subunit IIC
L2_031_030G1_scaffold_122_14
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12184..12531
DNA (348bp) protein (116aa)
celC.3; PTS system cellobiose-specific transporter subunit IIA (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIA subunit n=4 Tax=Firmicutes RepID=E4LW41_9CLOT
PTS system, Lactose/Cellobiose specific IIA subunit {ECO:0000313|EMBL:EFR36952.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_031_030G1_scaffold_122_15
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12531..13955
DNA (1425bp) protein (475aa)
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EFR37152.1}; EC=3.2.1.21 {ECO:0000313|EMBL:EFR37152.1};; EC=3.2.1.86 {ECO:0000313|EMBL:EFR37152.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosid ase (EC:3.2.1.86 3.2.1.21)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AY10_9FIRM
L2_031_030G1_scaffold_122_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14123..16153)
DNA (2031bp) protein (677aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1AY09_9FIRM
PRD domain protein {ECO:0000313|EMBL:EQJ59484.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
transcriptional antiterminator BglG
L2_031_030G1_scaffold_122_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16347..16775
DNA (429bp) protein (143aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1AY08_9FIRM
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein {ECO:0000313|EMBL:EQJ59485.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
L2_031_030G1_scaffold_122_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16772..17524
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1AY07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ59486.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
frcK; fructose transport system kinase
L2_031_030G1_scaffold_122_19
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17521..18921
DNA (1401bp) protein (467aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=2 Tax=Firmicutes RepID=E4LW35_9CLOT
EIICB-Mtl {ECO:0000313|EMBL:CDC85221.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
PTS system, mannitol-specific IIC subunit
L2_031_030G1_scaffold_122_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18938..20191
DNA (1254bp) protein (418aa)
L-sorbose 1-phosphate reductase (EC:1.1.1.-)
GroES-like protein n=5 Tax=Firmicutes RepID=E4LW34_9CLOT
Zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:EQJ59488.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_030G1_scaffold_122_21
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20787..22247)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VP87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75319.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
L2_031_030G1_scaffold_122_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22244..23116)
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B5C0_9FIRM
ABC transporter family protein {ECO:0000313|EMBL:EQJ59510.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC transporter related protein
L2_031_030G1_scaffold_122_23
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23101..23817)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AY00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85215.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_031_030G1_scaffold_122_24
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23789..24355)
DNA (567bp) protein (189aa)
Sigma-70 family RNA polymerase sigma factor n=5 Tax=Firmicutes RepID=H1AXZ9_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CDC85214.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
ECF subfamily RNA polymerase sigma factor
L2_031_030G1_scaffold_122_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24545..24934)
DNA (390bp) protein (130aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AXZ8_9FIRM
PTS system fructose IIA component family protein {ECO:0000313|EMBL:EQJ59513.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system fructose subfamily transporter subunit IIA
L2_031_030G1_scaffold_122_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24938..26104)
DNA (1167bp) protein (389aa)
SIS domain protein n=3 Tax=Firmicutes RepID=T4NVS0_CLODI
SIS domain protein {ECO:0000313|EMBL:EQJ59514.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_030G1_scaffold_122_27
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26073..26894)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AXT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC86314.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
PTS system mannose-specific transporter subunitIID
L2_031_030G1_scaffold_122_28
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26887..27636)
DNA (750bp) protein (250aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AXS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC86315.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
PTS system sorbose-specific transporter subunit IIC
L2_031_030G1_scaffold_122_29
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27720..28190)
DNA (471bp) protein (157aa)
Protein-N(pi)-phosphohistidine--sugarphosphotransferase (EC:2.7.1.69)
PTS system sorbose subfamily IIB component n=7 Tax=Firmicutes RepID=E4LW24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO31925.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_031_030G1_scaffold_122_30
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28259..31000)
DNA (2742bp) protein (914aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AXS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC86317.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
sigma-54 dependent transcription regulator
Displaying items 1-30 of 45 in total

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