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L2_031_030G1_scaffold_135

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_135_1
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3..449)
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AS58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83215.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_031_030G1_scaffold_135_2
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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698..1693
DNA (996bp) protein (332aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Pyruvate kinase n=3 Tax=Firmicutes RepID=E4LZL8_9CLOT
Pyruvate kinase
L2_031_030G1_scaffold_135_3
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1799..2815)
DNA (1017bp) protein (339aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EFR35839.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EFR35839.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=2 Tax=Firmicutes RepID=E4LZL9_9CLOT
L2_031_030G1_scaffold_135_4
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2835..4100)
DNA (1266bp) protein (422aa)
Shikimate kinase {ECO:0000313|EMBL:EFR35744.1}; EC=2.7.1.71 {ECO:0000313|EMBL:EFR35744.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Shikimate kinase n=2 Tax=Clostridiales RepID=E4LZM0_9CLOT
Shikimate 5-dehydrogenase
L2_031_030G1_scaffold_135_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4403..5308)
DNA (906bp) protein (302aa)
LysR substrate binding domain protein n=4 Tax=Firmicutes RepID=E4LZM2_9CLOT
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:EQJ53890.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
yybE1; HTH-type transcriptional regulator YybE
L2_031_030G1_scaffold_135_6
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5470..7464
DNA (1995bp) protein (665aa)
Pyridine nucleotide-disulfide oxidoreductase n=4 Tax=Firmicutes RepID=E4LZM3_9CLOT
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFR35686.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L2_031_030G1_scaffold_135_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7503..8375
DNA (873bp) protein (291aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=7 Tax=Firmicutes RepID=E4LZM4_9CLOT
L2_031_030G1_scaffold_135_8
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8403..9581
DNA (1179bp) protein (393aa)
Transporter, major facilitator family protein n=4 Tax=Firmicutes RepID=E4LZM5_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFR35859.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Major Facilitator Superfamily.
L2_031_030G1_scaffold_135_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9666..10178
DNA (513bp) protein (171aa)
TRAP transporter, DctQ-like membrane protein n=4 Tax=Firmicutes RepID=E4LZM6_9CLOT
Tripartite ATP-independent periplasmic transporter, DctQ family {ECO:0000313|EMBL:EQJ53886.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
TRAP-type C4-dicarboxylate transport system, small permease component
L2_031_030G1_scaffold_135_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10183..11475
DNA (1293bp) protein (431aa)
TRAP transporter, DctM subunit n=4 Tax=Firmicutes RepID=E4LZM7_9CLOT
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EQJ53885.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
TRAP transporter, DctM subunit
L2_031_030G1_scaffold_135_11
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11489..12493
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VNJ8_9FIRM
DctP family TRAP transporter solute receptor {ECO:0000313|EMBL:ENY85651.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L2_031_030G1_scaffold_135_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12502..13263
DNA (762bp) protein (254aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase n=5 Tax=Firmicutes RepID=E4LZM9_9CLOT
L2_031_030G1_scaffold_135_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13578..14420
DNA (843bp) protein (281aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.18.1.2 1.97.-.-)
Ferredoxin--NADP+ reductase, subunit alpha n=7 Tax=Firmicutes RepID=E4LZN0_9CLOT
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:EQJ53882.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_030G1_scaffold_135_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14422..15807
DNA (1386bp) protein (462aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EQJ53881.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EQJ53881.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
glutamate synthase (NADPH), homotetrameric (EC:1.4.1.13)
Glutamate synthase (NADPH), homotetrameric n=2 Tax=Firmicutes RepID=H1AS45_9FIRM
L2_031_030G1_scaffold_135_15
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16162..16404
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LZN2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR35718.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_031_030G1_scaffold_135_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16702..19101
DNA (2400bp) protein (800aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
leuS; leucyl-tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase n=5 Tax=Firmicutes RepID=E4LZN3_9CLOT
L2_031_030G1_scaffold_135_17
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19420..20289
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=E4LZN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR35725.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_031_030G1_scaffold_135_18
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20443..21684
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B8X9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO28807.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L2_031_030G1_scaffold_135_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21891..22628
DNA (738bp) protein (246aa)
Probable transcriptional regulatory protein HMPREF9406_2063 n=5 Tax=Firmicutes RepID=E4LPH7_9CLOT
Probable transcriptional regulatory protein QSI_3348 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_030G1_scaffold_135_20
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22983..24320
DNA (1338bp) protein (446aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hisS; histidyl-tRNA ligase (EC:6.1.1.21)
Histidine--tRNA ligase n=5 Tax=Firmicutes RepID=E4LPH6_9CLOT
L2_031_030G1_scaffold_135_21
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24333..26078
DNA (1746bp) protein (582aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EFR39472.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EFR39472.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
aspS; aspartyl-tRNA synthase (EC:6.1.1.12)
Aspartate--tRNA ligase n=4 Tax=Firmicutes RepID=E4LPH5_9CLOT
L2_031_030G1_scaffold_135_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26220..26372
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=E4LPH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ53871.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_030G1_scaffold_135_23
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26482..26910)
DNA (429bp) protein (143aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LPH3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC83282.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_031_030G1_scaffold_135_24
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26922..27362)
DNA (441bp) protein (147aa)
LytTr DNA-binding domain protein n=5 Tax=Firmicutes RepID=E4LPH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC83283.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
putative DNA-binding rotein
L2_031_030G1_scaffold_135_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27374..28276)
DNA (903bp) protein (301aa)
ABC-2 type transporter n=5 Tax=Firmicutes RepID=E4LPH1_9CLOT
ABC-2 type transporter family protein {ECO:0000313|EMBL:EQJ53868.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC-2 family transporter protein
L2_031_030G1_scaffold_135_26
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28273..29196)
DNA (924bp) protein (308aa)
ABC transporter, ATP-binding protein n=5 Tax=Firmicutes RepID=E4LPH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC83287.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
ABC transporter ATP-binding protein
L2_031_030G1_scaffold_135_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29516..30448)
DNA (933bp) protein (311aa)
ATP-dependent DNA ligase domain protein n=5 Tax=Firmicutes RepID=E4LPG9_9CLOT
mRNA capping enzyme, catalytic domain protein {ECO:0000313|EMBL:EQJ53866.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ATP dependent DNA ligase
L2_031_030G1_scaffold_135_28
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30448..31242)
DNA (795bp) protein (265aa)
Probable DNA repair protein HMPREF9406_2053 n=5 Tax=Firmicutes RepID=E4LPG8_9CLOT
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Ku protein
L2_031_030G1_scaffold_135_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31959..32537
DNA (579bp) protein (193aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AS31_9FIRM
HD domain protein {ECO:0000313|EMBL:EQJ53862.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
putative HD superfamily hydrolase
L2_031_030G1_scaffold_135_30
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32745..33698)
DNA (954bp) protein (318aa)
PP-loop family protein n=5 Tax=Firmicutes RepID=E4LPG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC83294.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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