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L2_031_030G1_scaffold_143

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_143_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..124)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC23320.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_031_030G1_scaffold_143_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

384..1316
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UAZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68336.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_031_030G1_scaffold_143_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1316..2083
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68337.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_031_030G1_scaffold_143_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2154..2597
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68338.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ATPases involved in chromosome partitioning
L2_031_030G1_scaffold_143_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2918..3094
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TYB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68339.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_031_030G1_scaffold_143_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3091..3381
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68340.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_031_030G1_scaffold_143_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3409..3993
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68340.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Uncharacterized protein family (UPF0158)
L2_031_030G1_scaffold_143_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4099..5250)
DNA (1152bp) protein (384aa)
Alcohol dehydrogenase, class IV (EC:1.1.1.1)
1 3-propanediol dehydrogenase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UB01_9FIRM
1 3-propanediol dehydrogenase {ECO:0000313|EMBL:CCZ68341.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_031_030G1_scaffold_143_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5264..6481)
DNA (1218bp) protein (406aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
acetylornithine aminotransferase apoenzyme (EC:2.6.1.17 2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHQ1_9FIRM
L2_031_030G1_scaffold_143_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6515..7180)
DNA (666bp) protein (222aa)
Cytidylate kinase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRB7_9FIRM
Cytidylate kinase {ECO:0000313|EMBL:CCZ68343.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
cytidylate kinase
L2_031_030G1_scaffold_143_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7198..7938)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TYC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68344.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_031_030G1_scaffold_143_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7949..8707)
DNA (759bp) protein (253aa)
ABC-type amino acid transport/signal transduction system periplasmic component/domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRJ6_9FIRM
ABC-type amino acid transport/signal transduction system periplasmic component/domain protein {ECO:0000313|EMBL:CCZ68345.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein
L2_031_030G1_scaffold_143_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8736..9635)
DNA (900bp) protein (300aa)
Amino acid ABC transporter amino acid-binding protein/permease protein putative n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UB08_9FIRM
Amino acid ABC transporter amino acid-binding protein/permease protein putative {ECO:0000313|EMBL:CCZ68346.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
amino acid ABC transporter permease/substrate-binding protein
L2_031_030G1_scaffold_143_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9856..11052)
DNA (1197bp) protein (399aa)
Transcriptional regulatory protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHQ6_9FIRM
Transcriptional regulatory protein {ECO:0000313|EMBL:CCZ68347.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
transcriptional regulatory protein
L2_031_030G1_scaffold_143_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11097..12455)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68348.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Glycosidases
L2_031_030G1_scaffold_143_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13518..14741)
DNA (1224bp) protein (408aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
6-phosphofructokinase (EC:2.7.1.11)
Phosphofructokinase n=3 Tax=Lachnospiraceae RepID=A7B5Q6_RUMGN
L2_031_030G1_scaffold_143_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14883..15899
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UEK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67317.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Glycosyltransferases involved in cell wall biogenesis
L2_031_030G1_scaffold_143_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15983..16588
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BQG0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45442.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Rubrerythrin
L2_031_030G1_scaffold_143_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16589..18331
DNA (1743bp) protein (581aa)
Putative protease CspB n=2 Tax=Lachnospiraceae RepID=A7B5Q3_RUMGN
Putative protease CspB {ECO:0000313|EMBL:EDN76723.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
peptidase S8/S53 subtilisin kexin sedolisin
L2_031_030G1_scaffold_143_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18361..18588
DNA (228bp) protein (76aa)
DNA-binding protein, stimulates sugar fermentation n=2 Tax=Roseburia intestinalis RepID=D4KVN6_9FIRM
DNA-binding protein, stimulates sugar fermentation
Sugar fermentation stimulation protein-like family protein {ECO:0000313|EMBL:EEU98495.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_031_030G1_scaffold_143_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18795..21221
DNA (2427bp) protein (809aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GI56_9FIRM
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EEU98494.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_031_030G1_scaffold_143_22
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21213..22415)
DNA (1203bp) protein (401aa)
Transcriptional regulator, AraC family n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B9K5_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEG89957.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
AraC-type DNA-binding domain-containing proteins
L2_031_030G1_scaffold_143_23
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22581..25013
DNA (2433bp) protein (811aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B9K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG89958.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L2_031_030G1_scaffold_143_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25076..27412
DNA (2337bp) protein (779aa)
Cellobiose phosphorylase n=3 Tax=Roseburia intestinalis RepID=D4KVN9_9FIRM
Cellobiose phosphorylase {ECO:0000313|EMBL:CBL11429.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Cellobiose phosphorylase
L2_031_030G1_scaffold_143_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27504..28934
DNA (1431bp) protein (477aa)
Na+/melibiose symporter and related transporters n=2 Tax=Roseburia intestinalis RepID=D4KVP0_9FIRM
Na+/melibiose symporter and related transporters
Na+/melibiose symporter and related transporters {ECO:0000313|EMBL:CBL11430.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_031_030G1_scaffold_143_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29024..30700
DNA (1677bp) protein (559aa)
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase n=2 Tax=Roseburia intestinalis RepID=D4KVP1_9FIRM
Alpha-L-rhamnosidase N-terminal domain protein {ECO:0000313|EMBL:EEU98564.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase.
L2_031_030G1_scaffold_143_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30670..30912
DNA (243bp) protein (81aa)
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase n=2 Tax=Roseburia intestinalis RepID=D4KVP1_9FIRM
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase.
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:CBL11431.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_031_030G1_scaffold_143_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30929..33388
DNA (2460bp) protein (820aa)
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CBL11432.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CBL11432.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases n=3 Tax=Roseburia intestinalis RepID=D4KVP2_9FIRM
L2_031_030G1_scaffold_143_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33458..35929
DNA (2472bp) protein (824aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases n=2 Tax=Roseburia intestinalis RepID=D4KVP3_9FIRM
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EEU98574.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_031_030G1_scaffold_143_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35985..36125
DNA (141bp) protein (47aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C0B9L3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11434.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Displaying items 1-30 of 34 in total

View Taxonomy