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L2_031_030G1_scaffold_163

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_163_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(98..1051)
DNA (954bp) protein (318aa)
Branched-chain amino acid ABC transporter, permease protein n=5 Tax=Firmicutes RepID=E4LZB6_9CLOT
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:EQJ62441.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
inner-membrane translocator
L2_031_030G1_scaffold_163_2
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1055..2152)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1ASF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85705.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
inner-membrane translocator
L2_031_030G1_scaffold_163_3
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2130..3671)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1ASF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85706.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
ABC transporter ATP-binding protein
L2_031_030G1_scaffold_163_4
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3885..4988)
DNA (1104bp) protein (368aa)
Basic membrane protein n=5 Tax=Firmicutes RepID=E4LZB3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO28462.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
basic membrane lipoprotein
L2_031_030G1_scaffold_163_5
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5128..7488)
DNA (2361bp) protein (787aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1ASF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85708.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
DNA translocase FtsK
L2_031_030G1_scaffold_163_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7519..9177)
DNA (1659bp) protein (553aa)
Predicted hydrolase of the metallo-beta-lactamase superfamily (EC:3.1.-.-)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LZB1_9CLOT
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:EQJ62436.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_030G1_scaffold_163_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9379..10815)
DNA (1437bp) protein (479aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=4 Tax=Firmicutes RepID=E4LZB0_9CLOT
tRNA-i(6)A37 thiotransferase enzyme MiaB
L2_031_030G1_scaffold_163_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10889..11062)
DNA (174bp) protein (58aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=G1VN86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY85539.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
L2_031_030G1_scaffold_163_9
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(11212..12030)
DNA (819bp) protein (273aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VN85_9FIRM
Metallophosphoesterase {ECO:0000313|EMBL:ENY85538.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
metallophosphoesterase
L2_031_030G1_scaffold_163_10
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(11999..13552)
DNA (1554bp) protein (518aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
Ribonuclease Y n=6 Tax=Firmicutes RepID=E4LZA8_9CLOT
2',3'-cyclic-nucleotide 2'-phosphodiesterase
L2_031_030G1_scaffold_163_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13705..14757)
DNA (1053bp) protein (351aa)
Protein RecA n=5 Tax=Firmicutes RepID=E4LZA7_9CLOT
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
recA; recombinase A
L2_031_030G1_scaffold_163_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14791..15252)
DNA (462bp) protein (154aa)
Competence/damage-inducible domain protein CinA n=4 Tax=Firmicutes RepID=E4LZA6_9CLOT
Competence/damage-inducible CinA C-terminal domain protein {ECO:0000313|EMBL:EQJ62431.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
competence/damage-inducible protein CinA
L2_031_030G1_scaffold_163_13
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(15255..15860)
DNA (606bp) protein (202aa)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=5 Tax=Firmicutes RepID=H1ASG7_9FIRM
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CDC85716.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
L2_031_030G1_scaffold_163_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15829..16773)
DNA (945bp) protein (315aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LZA4_9CLOT
Helix-turn-helix family protein {ECO:0000313|EMBL:EQJ62429.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
XRE family transcriptional regulator
L2_031_030G1_scaffold_163_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17439..17762)
DNA (324bp) protein (108aa)
DivIVA domain protein n=5 Tax=Firmicutes RepID=E4LZA3_9CLOT
DivIVA domain protein {ECO:0000313|EMBL:EQJ62427.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
cell division protein GpsB
L2_031_030G1_scaffold_163_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18075..20726
DNA (2652bp) protein (884aa)
Penicillin binding transpeptidase domain protein n=2 Tax=Clostridiales RepID=T4P4Q2_CLODI
Putative penicillin-binding protein 1A/1B {ECO:0000313|EMBL:EFR35766.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
penicillin-binding, 1A family protein
L2_031_030G1_scaffold_163_17
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20858..21475
DNA (618bp) protein (206aa)
Holliday junction resolvase RecU {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056687}; EC=3.1.22.- {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056689};; Recombination protein U homolog {ECO:0000256|HAMAP-Rule:MF_00130}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Holliday junction resolvase RecU n=7 Tax=Firmicutes RepID=E4LZZ9_9CLOT
Penicillin-binding protein-related factor A, putative recombinase
L2_031_030G1_scaffold_163_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21444..25007
DNA (3564bp) protein (1188aa)
Penicillin binding transpeptidase domain protein n=1 Tax=Clostridium difficile P28 RepID=T4P3Z4_CLODI
Penicillin binding transpeptidase domain protein {ECO:0000313|EMBL:EQJ62424.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
penicillin-binding protein 1A
L2_031_030G1_scaffold_163_19
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25231..25878)
DNA (648bp) protein (216aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Endonuclease III n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B9B2_9FIRM
nth; endonuclease III
L2_031_030G1_scaffold_163_20
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25878..26414)
DNA (537bp) protein (179aa)
DnaD domain protein n=5 Tax=Firmicutes RepID=E4LZZ6_9CLOT
DnaD domain protein {ECO:0000313|EMBL:EFR35817.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
DNA replication protein DnaD
L2_031_030G1_scaffold_163_21
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26416..26874)
DNA (459bp) protein (153aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LZZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85725.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_031_030G1_scaffold_163_22
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27055..27735)
DNA (681bp) protein (227aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
MTA/SAH nucleosidase n=5 Tax=Firmicutes RepID=E4LZZ4_9CLOT
L2_031_030G1_scaffold_163_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27732..28445)
DNA (714bp) protein (238aa)
Methyltransferase domain protein n=5 Tax=Firmicutes RepID=E4LZZ3_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:EQJ62419.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
methyltransferase
L2_031_030G1_scaffold_163_24
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28442..28780)
DNA (339bp) protein (113aa)
Ribosomal silencing factor RsfS n=5 Tax=Firmicutes RepID=E4LZZ2_9CLOT
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Iojap-like protein
L2_031_030G1_scaffold_163_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28797..29825)
DNA (1029bp) protein (343aa)
Nicotinate-nucleotide adenylyltransferase {ECO:0000256|SAAS:SAAS00086517}; EC=2.7.7.18 {ECO:0000256|SAAS:SAAS00086517};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Nicotinate-nucleotide adenylyltransferase n=5 Tax=Firmicutes RepID=E4LZZ1_9CLOT
nadD; nicotinate-nucleotide adenylyltransferase
L2_031_030G1_scaffold_163_26
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29829..30113)
DNA (285bp) protein (95aa)
RNA-binding protein, YhbY family n=7 Tax=Firmicutes RepID=E4LZZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85521.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L2_031_030G1_scaffold_163_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30113..31195)
DNA (1083bp) protein (361aa)
Ribosome biogenesis GTPase YqeH n=5 Tax=Firmicutes RepID=E4LZY9_9CLOT
Ferrous iron transport B family protein {ECO:0000313|EMBL:EQJ62415.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
GTP-binding protein YqeH
L2_031_030G1_scaffold_163_28
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31188..31712)
DNA (525bp) protein (175aa)
HAD phosphatase, family IIIA n=6 Tax=Firmicutes RepID=E4LZY8_9CLOT
Phosphatidylglycerophosphatase GEP4 {ECO:0000313|EMBL:CDC85732.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
L2_031_030G1_scaffold_163_29
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31864..32520
DNA (657bp) protein (219aa)
Transcriptional regulator, TetR family n=5 Tax=Firmicutes RepID=E4LZY7_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFR35866.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
TetR family transcriptional regulator
L2_031_030G1_scaffold_163_30
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32586..33437
DNA (852bp) protein (284aa)
Transporter, major facilitator family protein n=4 Tax=Firmicutes RepID=E4LZY6_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFR35863.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
major facilitator superfamily protein
Displaying 30 items

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