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L2_031_030G1_scaffold_167

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_167_1
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

152..757
DNA (606bp) protein (202aa)
Transcriptional regulator n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KII9_CLOPA
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGK99440.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L2_031_030G1_scaffold_167_2
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

934..1743
DNA (810bp) protein (270aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CT31_9FIRM
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:ERI93659.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
alpha/beta hydrolase
L2_031_030G1_scaffold_167_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1991..3211
DNA (1221bp) protein (407aa)
Chloride channel protein EriC n=2 Tax=Clostridium butyricum RepID=M8JLV2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34189.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Chloride ion channel protein
L2_031_030G1_scaffold_167_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3566..4213
DNA (648bp) protein (216aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JD10_CLOBU
Ureidoglycine aminohydrolase {ECO:0000313|EMBL:KJZ88549.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
uncharacterized protein, possibly involved in glyoxylate utilization
L2_031_030G1_scaffold_167_5
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4440..4883)
DNA (444bp) protein (148aa)
Regulatory protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EGH2_CLOPA
transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EET84748.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
L2_031_030G1_scaffold_167_6
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5179..5589
DNA (411bp) protein (137aa)
Cupin n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EEW0_CLOPA
hypothetical protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EET84749.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
L2_031_030G1_scaffold_167_7
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5643..5969
DNA (327bp) protein (109aa)
Carboxymuconolactone decarboxylase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZ88_9CLOT
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EHI97661.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
4-carboxymuconolactone decarboxylase
L2_031_030G1_scaffold_167_8
Paenibacillus sp. FSL R7-0273, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6087..6926
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Paenibacillus massiliensis RepID=UPI00036F9A6B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ46480.1}; TaxID=1536772 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0273.;"
L2_031_030G1_scaffold_167_9
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6958..8115
DNA (1158bp) protein (386aa)
patB1; cystathionine beta-lyase PatB (EC:4.4.1.8)
Cystathionine beta-lyase PatB {ECO:0000313|EMBL:AGF56664.1}; EC=4.4.1.8 {ECO:0000313|EMBL:AGF56664.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Cystathionine beta-lyase PatB n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MFH4_9CLOT
L2_031_030G1_scaffold_167_10
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8159..9484
DNA (1326bp) protein (442aa)
Mate efflux family protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MGU6_9CLOT
mate efflux family protein
Mate efflux family protein {ECO:0000313|EMBL:AGF55563.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_031_030G1_scaffold_167_11
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9879..10634)
DNA (756bp) protein (252aa)
Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UR70_CLOBO
ABC transporter {ECO:0000313|EMBL:KEZ86798.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
iron chelate uptake ABC transporter, FeCT family, ATP-binding protein
L2_031_030G1_scaffold_167_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10634..11695)
DNA (1062bp) protein (354aa)
ABC transporter n=1 Tax=Clostridium botulinum RepID=UPI000382A83C
HmuU protein
ABC transporter {ECO:0000313|EMBL:KIL09786.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_031_030G1_scaffold_167_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11688..12701)
DNA (1014bp) protein (338aa)
Putative iron compound ABC transporter, periplasmic iron compound-binding protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UR72_CLOBO
Putative iron compound ABC transporter, periplasmic iron compound-binding protein {ECO:0000313|EMBL:EES48699.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
putative iron compound ABC transporter periplasmic iron compound-binding protein
L2_031_030G1_scaffold_167_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13709..13849
DNA (141bp) protein (47aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QZI9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33601.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_031_030G1_scaffold_167_15
unknown

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14013..14114
DNA (102bp) protein (34aa)

This feature has no annotations

L2_031_030G1_scaffold_167_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14162..14932
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IAZ0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP56516.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_031_030G1_scaffold_167_17
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15919..17232
DNA (1314bp) protein (438aa)
ABC transporter substrate-binding protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FVP7_CLOPA
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETD67472.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
extracellular solute-binding protein
L2_031_030G1_scaffold_167_18
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17364..18263
DNA (900bp) protein (300aa)
Permease component of ABC-type sugar transporter n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U7X9_9CLOT
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:EKQ58311.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
binding-protein-dependent transport systems inner membrane component
L2_031_030G1_scaffold_167_19
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18269..19111
DNA (843bp) protein (281aa)
ABC transporter permease n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FT76_CLOPA
ABC transporter permease {ECO:0000313|EMBL:ETD67469.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
binding-protein-dependent transport systems inner membrane component
L2_031_030G1_scaffold_167_20
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19157..20941
DNA (1785bp) protein (595aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M2F5_CLOB8
integral membrane sensor signal transduction histidine kinase
L2_031_030G1_scaffold_167_21
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20941..22503
DNA (1563bp) protein (521aa)
histidine kinase n=1 Tax=Clostridium beijerinckii RepID=UPI0002EFE6FA
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABR36784.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_031_030G1_scaffold_167_22
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22500..23825
DNA (1326bp) protein (442aa)
Glycoside hydrolase, family 30 n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M2F3_CLOB8
glycoside hydrolase family protein
Glycoside hydrolase, family 30 {ECO:0000313|EMBL:ABR36783.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_031_030G1_scaffold_167_23
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23853..25982
DNA (2130bp) protein (710aa)
Glycoside hydrolase, family 3 domain protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M2F2_CLOB8
glycoside hydrolase family 3 protein
Glycoside hydrolase, family 3 domain protein {ECO:0000313|EMBL:ABR36782.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_031_030G1_scaffold_167_24
unknown

Not on your lists

26295..26429
DNA (135bp) protein (45aa)

This feature has no annotations

L2_031_030G1_scaffold_167_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26551..27960
DNA (1410bp) protein (470aa)
Mate efflux family protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBD8_CLOBU
Mate efflux family protein {ECO:0000313|EMBL:EEP56244.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
putative efflux protein, MATE family
L2_031_030G1_scaffold_167_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28642..29043
DNA (402bp) protein (134aa)
UPI0003D6332E related cluster n=1 Tax=unknown RepID=UPI0003D6332E
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:ETI89273.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
transcriptional regulator, LysR family
L2_031_030G1_scaffold_167_27
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29230..30342
DNA (1113bp) protein (371aa)
methionine synthase, vitamin-B12 independent (EC:2.1.1.14)
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:AGF58560.1}; EC=2.1.1.14 {ECO:0000313|EMBL:AGF58560.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Methionine synthase, vitamin-B12 independent n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LZ35_9CLOT
L2_031_030G1_scaffold_167_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30778..32160
DNA (1383bp) protein (461aa)
D-serine/D-alanine/glycine transporter n=2 Tax=Clostridium botulinum B RepID=B2TJI1_CLOBB
D-serine/D-alanine/glycine transporter
Amino-acid permease {ECO:0000313|EMBL:CDH90315.1}; D-serine/D-alanine/glycine transporter {ECO:0000313|EMBL:ACD22506.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_031_030G1_scaffold_167_29
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32425..34221)
DNA (1797bp) protein (599aa)
heavy metal-associated domain-containing protein n=1 Tax=Clostridium beijerinckii RepID=UPI0003089C65
Heavy metal-associated domain-containing protein {ECO:0000313|EMBL:ETD66883.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
heavy metal transport/detoxification protein
L2_031_030G1_scaffold_167_30
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34608..34943
DNA (336bp) protein (112aa)
Rubredoxin-type Fe(Cys)4 protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPX4_CELLD
rubredoxin-type Fe(Cys)4 protein
Rubredoxin-type Fe(Cys)4 protein {ECO:0000313|EMBL:ADZ84909.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Displaying items 1-30 of 47 in total

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