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L2_031_030G1_scaffold_170

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_170_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

79..459
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NMP8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ57011.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_030G1_scaffold_170_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

459..2111
DNA (1653bp) protein (551aa)
Lysozyme-like family protein n=1 Tax=Clostridium difficile P28 RepID=T4NNW3_CLODI
Lysozyme-like family protein {ECO:0000313|EMBL:EQJ57012.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
CHAP domain.
L2_031_030G1_scaffold_170_3
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2327..3520)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NDF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS78042.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Site-specific recombinase XerD
L2_031_030G1_scaffold_170_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3801..4943)
DNA (1143bp) protein (381aa)
Helix-turn-helix family protein n=1 Tax=Clostridium difficile P28 RepID=T4NIT6_CLODI
Helix-turn-helix family protein {ECO:0000313|EMBL:EQJ55330.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_030G1_scaffold_170_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5447..6109
DNA (663bp) protein (221aa)
Helix-turn-helix family protein n=1 Tax=Clostridium difficile P28 RepID=T4NJ49_CLODI
Helix-turn-helix family protein {ECO:0000313|EMBL:EQJ55329.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Predicted transcription factor, homolog of eukaryotic MBF1
L2_031_030G1_scaffold_170_6
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6248..6589)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HUQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO16624.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
HxlR family transcriptional regulator
L2_031_030G1_scaffold_170_7
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6812..7054
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZ70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63954.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_031_030G1_scaffold_170_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7151..8185
DNA (1035bp) protein (345aa)
Radical SAM additional 4Fe4S-binding SPASM domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NI00_CLODI
Radical SAM additional 4Fe4S-binding SPASM domain protein {ECO:0000313|EMBL:EQJ55326.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
radical SAM domain-containing protein
L2_031_030G1_scaffold_170_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8201..8788
DNA (588bp) protein (196aa)
Nitroreductase family protein n=1 Tax=Clostridium difficile P28 RepID=T4NIT1_CLODI
Nitroreductase family protein {ECO:0000313|EMBL:EQJ55325.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
nitroreductase
L2_031_030G1_scaffold_170_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8812..9345
DNA (534bp) protein (178aa)
Flavin reductase like domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NJ44_CLODI
Flavin reductase like domain protein {ECO:0000313|EMBL:EQJ55324.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_030G1_scaffold_170_11
unknown

Not on your lists

comp(9326..9502)
DNA (177bp) protein (59aa)

This feature has no annotations

L2_031_030G1_scaffold_170_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9527..9946
DNA (420bp) protein (140aa)
RNA polymerase sigma factor, sigma-70 family protein n=1 Tax=Clostridium difficile P28 RepID=T4NDC6_CLODI
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EQJ55323.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
putative conjugative transposon
L2_031_030G1_scaffold_170_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9952..10188
DNA (237bp) protein (79aa)
Helix-turn-helix domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NJ97_CLODI
Helix-turn-helix domain protein {ECO:0000313|EMBL:EQJ55322.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
putative conjugative transposon protein
L2_031_030G1_scaffold_170_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10422..10727
DNA (306bp) protein (102aa)
PTS system mannose/fructose/sorbose IID component family protein n=1 Tax=Clostridium difficile P28 RepID=T4NIS0_CLODI
PTS system mannose/fructose/sorbose IID component family protein {ECO:0000313|EMBL:EQJ55315.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L2_031_030G1_scaffold_170_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10741..11763
DNA (1023bp) protein (341aa)
SIS domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NJ35_CLODI
SIS domain protein {ECO:0000313|EMBL:EQJ55314.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
sugar isomerase
L2_031_030G1_scaffold_170_16
unknown

Not on your lists

comp(11756..11944)
DNA (189bp) protein (63aa)

This feature has no annotations

L2_031_030G1_scaffold_170_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12386..12826
DNA (441bp) protein (147aa)
Bacterial regulatory s, luxR family protein n=1 Tax=Clostridium difficile P28 RepID=T4NDB6_CLODI
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:EQJ55313.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_030G1_scaffold_170_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12886..13245
DNA (360bp) protein (120aa)
Resolvase, N terminal domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NJ87_CLODI
Resolvase, N terminal domain protein {ECO:0000313|EMBL:EQJ55312.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_030G1_scaffold_170_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13315..13734
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NHY5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ55311.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_030G1_scaffold_170_20
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14602..14973
DNA (372bp) protein (124aa)
ndoA2; mRNA interferase eNdoA (EC:3.1.-.-)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
mRNA interferase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K5F2_CLOPA
L2_031_030G1_scaffold_170_21
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14960..15340
DNA (381bp) protein (127aa)
Sigma-70, region 4 n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GRQ2_FILAD
Sigma-70 region 4 type 2 {ECO:0000313|EMBL:CDW99899.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
sigma-70, region 4 superfamily
L2_031_030G1_scaffold_170_22
unknown

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15544..15816
DNA (273bp) protein (91aa)

This feature has no annotations

L2_031_030G1_scaffold_170_23
unknown

Not on your lists

16109..16279
DNA (171bp) protein (57aa)

This feature has no annotations

L2_031_030G1_scaffold_170_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16522..17619)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATB1_9FIRM
Phage integrase family protein {ECO:0000313|EMBL:EQJ55310.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
phage integrase family protein
L2_031_030G1_scaffold_170_25
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17669..18265)
DNA (597bp) protein (199aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1ATB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO20654.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L2_031_030G1_scaffold_170_26
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18457..18657
DNA (201bp) protein (67aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1ATA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC87231.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
phage protein
L2_031_030G1_scaffold_170_27
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18648..19826
DNA (1179bp) protein (393aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO20652.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L2_031_030G1_scaffold_170_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20095..21306
DNA (1212bp) protein (404aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATA7_9FIRM
Plasmid recombination enzyme family protein {ECO:0000313|EMBL:EQJ55308.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Plasmid recombination enzyme.
L2_031_030G1_scaffold_170_29
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21581..21787
DNA (207bp) protein (69aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC87228.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
putative transcriptional regulator
L2_031_030G1_scaffold_170_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21790..23298
DNA (1509bp) protein (503aa)
Type I restriction-modification system M subunit n=2 Tax=Firmicutes RepID=R6VYT1_9FIRM
N-6 DNA Methylase family protein {ECO:0000313|EMBL:EQJ55305.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
type I restriction-modification system DNA methylase
Displaying items 1-30 of 38 in total

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