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L2_031_030G1_scaffold_189

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_189_1
unknown

Not on your lists

comp(2..67)
DNA (66bp) protein (22aa)

This feature has no annotations

L2_031_030G1_scaffold_189_2
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(587..2587)
DNA (2001bp) protein (667aa)
Small GTP-binding protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MKK1_9CLOT
small GTP-binding protein
Small GTP-binding protein {ECO:0000313|EMBL:AGF56798.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_031_030G1_scaffold_189_3
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3046..4419)
DNA (1374bp) protein (458aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T036_9CLOT
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EKQ52208.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
methyl-accepting chemotaxis protein
L2_031_030G1_scaffold_189_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4736..6163)
DNA (1428bp) protein (476aa)
Cell volume regulation protein A n=2 Tax=Clostridium botulinum B RepID=B2TIS9_CLOBB
potassium/proton antiporter
Cell volume regulation protein A {ECO:0000313|EMBL:ACD23364.1}; Na+/H+ exchanger {ECO:0000313|EMBL:CDH89303.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_031_030G1_scaffold_189_5
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6578..7495)
DNA (918bp) protein (306aa)
rnz; ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Ribonuclease Z n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSY0_CLOSA
L2_031_030G1_scaffold_189_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7512..8300)
DNA (789bp) protein (263aa)
UPF0246 protein CLO_1449 n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5USK2_CLOBO
UPF0246 protein CLO_1449 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hypothetical protein
L2_031_030G1_scaffold_189_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8477..8632
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSC3_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42546.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_030G1_scaffold_189_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8928..9215)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPN9_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42545.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_030G1_scaffold_189_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9321..9836)
DNA (516bp) protein (172aa)
Isochorismatase hydrolase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MP32_CLOSA
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:AGX42544.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_030G1_scaffold_189_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9928..10497)
DNA (570bp) protein (190aa)
TQXA domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A8F0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92900.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
TQXA domain-containing protein
L2_031_030G1_scaffold_189_11
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10580..11335)
DNA (756bp) protein (252aa)
exoA; exodeoxyribonuclease ExoA (EC:3.1.11.2)
Exodeoxyribonuclease ExoA {ECO:0000313|EMBL:AGF57977.1}; EC=3.1.11.2 {ECO:0000313|EMBL:AGF57977.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Exodeoxyribonuclease ExoA n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N3E1_9CLOT
L2_031_030G1_scaffold_189_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11562..11840)
DNA (279bp) protein (93aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
2-dehydropantoate 2-reductase n=2 Tax=Clostridium RepID=N9Z7C0_9CLOT
2-dehydropantoate 2-reductase
L2_031_030G1_scaffold_189_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11837..12502)
DNA (666bp) protein (222aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003687F0C
L2_031_030G1_scaffold_189_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12748..13836)
DNA (1089bp) protein (363aa)
Proteasome-activating nucleotidase Pan n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSB9_CLOSA
pan; proteasome-activating nucleotidase Pan
Proteasome-activating nucleotidase Pan {ECO:0000313|EMBL:AGX42541.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_030G1_scaffold_189_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14408..16432)
DNA (2025bp) protein (675aa)
UPI0003D62FE1 related cluster n=1 Tax=unknown RepID=UPI0003D62FE1
UPF0313 protein Q607_CBUC00053G0045 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ygiQ1; radical SAM protein YgiQ
L2_031_030G1_scaffold_189_16
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16610..16750)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2N4H7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68945.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_031_030G1_scaffold_189_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16805..18661)
DNA (1857bp) protein (619aa)
lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-)
Multidrug ABC transporter ATP-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATY8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84823.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_031_030G1_scaffold_189_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18654..20915)
DNA (2262bp) protein (754aa)
UPI0003D59B12 related cluster n=1 Tax=unknown RepID=UPI0003D59B12
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:ETI90732.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ABC transporter ATP-binding/permease
L2_031_030G1_scaffold_189_19
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21149..21688)
DNA (540bp) protein (180aa)
Adenine phosphoribosyltransferase {ECO:0000313|EMBL:EST10733.1}; EC=2.4.2.7 {ECO:0000313|EMBL:EST10733.1};; TaxID=1395513 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; Sporolactobacillus.;" source="Sporolactobacillus laevolacticus DSM 442.;"
adenine phosphoribosyltransferase n=1 Tax=Bacillus acidiproducens RepID=UPI00036AFB25
adenine phosphoribosyltransferase
L2_031_030G1_scaffold_189_20
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21712..22638)
DNA (927bp) protein (309aa)
rihC; Non-specific ribonucleoside hydrolase RihC (EC:3.2.-.-)
ribonucleoside hydrolase n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0002FBD7F8
Ribonucleoside hydrolase {ECO:0000313|EMBL:AKF93832.1}; TaxID=1465 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus laterosporus (Bacillus laterosporus).;"
L2_031_030G1_scaffold_189_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22778..23884)
DNA (1107bp) protein (369aa)
Lipoprotein, bmp family n=2 Tax=Clostridium botulinum E RepID=B2UXJ8_CLOBA
membrane lipoprotein tmpc
Lipoprotein, bmp family {ECO:0000313|EMBL:EES47994.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L2_031_030G1_scaffold_189_22
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24483..25838)
DNA (1356bp) protein (452aa)
UPF0210 protein Cbei_2352 n=2 Tax=Clostridium RepID=Y2352_CLOB8
hypothetical protein
UPF0210 protein Cbei_2352 {ECO:0000255|HAMAP-Rule:MF_01221}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_031_030G1_scaffold_189_23
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25852..26121)
DNA (270bp) protein (90aa)
UPF0237 protein Cbei_2351 n=2 Tax=Clostridium RepID=A6LVY1_CLOB8
hypothetical protein
UPF0237 protein X276_21315 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_031_030G1_scaffold_189_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26332..26670
DNA (339bp) protein (113aa)
BdrR n=2 Tax=Clostridium butyricum RepID=B1QSU9_CLOBU
Potassium uptake protein, integral membrane component, KtrB {ECO:0000313|EMBL:KJZ84839.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_031_030G1_scaffold_189_25
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27016..27246)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ56240.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_031_030G1_scaffold_189_26
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27368..27826)
DNA (459bp) protein (153aa)
Transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SYK0_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:EKQ51458.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
transcriptional regulator
Displaying 26 items

View Taxonomy