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L2_031_030G1_scaffold_228

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_228_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1217
DNA (1215bp) protein (405aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Exodeoxyribonuclease 7 large subunit n=4 Tax=Firmicutes PF7_9CLOT">RepID=E4LPF7_9CLOT
xseA; exodeoxyribonuclease VII large subunit
L2_031_030G1_scaffold_228_2
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1217..1429
DNA (213bp) protein (71aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Exodeoxyribonuclease 7 small subunit n=7 Tax=Firmicutes PF6_9CLOT">RepID=E4LPF6_9CLOT
exodeoxyribonuclease VII small subunit
L2_031_030G1_scaffold_228_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1422..2264
DNA (843bp) protein (281aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Polyprenyl synthetase n=5 Tax=Firmicutes PF5_9CLOT">RepID=E4LPF5_9CLOT
Geranyl transferase {ECO:0000313|EMBL:KGJ53771.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
L2_031_030G1_scaffold_228_4
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2278..4155
DNA (1878bp) protein (626aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
1-deoxy-D-xylulose-5-phosphate synthase n=4 Tax=Firmicutes PF4_9CLOT">RepID=E4LPF4_9CLOT
dxs; 1-deoxy-D-xylulose-5-phosphate synthase
L2_031_030G1_scaffold_228_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4152..4931
DNA (780bp) protein (260aa)
Hemolysin TlyA family protein n=5 Tax=Firmicutes RepID=H1AS18_9FIRM
Hemolysin TlyA family protein {ECO:0000313|EMBL:EQJ53849.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hemolysin-like protein
L2_031_030G1_scaffold_228_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4936..6597
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=6 Tax=Firmicutes PF2_9CLOT">RepID=E4LPF2_9CLOT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
DNA repair protein RecN
L2_031_030G1_scaffold_228_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6649..7650
DNA (1002bp) protein (334aa)
stage IV sporulation protein B (EC:3.4.21.116)
Stage IV sporulation protein B n=5 Tax=Firmicutes RepID=H1AS16_9FIRM
SpoIVB peptidase S55 family protein {ECO:0000313|EMBL:EQJ53847.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_030G1_scaffold_228_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7835..8668
DNA (834bp) protein (278aa)
Stage 0 sporulation protein A n=7 Tax=Firmicutes RepID=G1VNN5_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
chemotaxis protein CheY
L2_031_030G1_scaffold_228_9
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8721..9902
DNA (1182bp) protein (394aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=5 Tax=Firmicutes RepID=E4LPE9_9CLOT
L2_031_030G1_scaffold_228_10
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9997..10620
DNA (624bp) protein (208aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VNN7_9FIRM
Stage II sporulation protein M {ECO:0000313|EMBL:ENY85688.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
stage II sporulation protein M
L2_031_030G1_scaffold_228_11
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10658..11320
DNA (663bp) protein (221aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1AS12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29162.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
methyltransferase
L2_031_030G1_scaffold_228_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11317..12240
DNA (924bp) protein (308aa)
Tyrosine recombinase XerC n=5 Tax=Firmicutes RepID=E4LPE6_9CLOT
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
xerD; site-specific tyrosine recombinase XerD
L2_031_030G1_scaffold_228_13
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12553..13389
DNA (837bp) protein (279aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LPE5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85691.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Mrp protein
L2_031_030G1_scaffold_228_14
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13656..14957
DNA (1302bp) protein (434aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AS09_9FIRM
L2_031_030G1_scaffold_228_15
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15104..16360
DNA (1257bp) protein (419aa)
L-glutamine synthetase (EC:6.3.1.2)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B8U4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83330.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_031_030G1_scaffold_228_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16377..16949
DNA (573bp) protein (191aa)
ANTAR domain protein n=5 Tax=Firmicutes RepID=E4LPE2_9CLOT
Response regulator {ECO:0000313|EMBL:EQJ53837.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
response regulator receiver/ANTAR domain-containing protein
L2_031_030G1_scaffold_228_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17051..18652
DNA (1602bp) protein (534aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
CTP synthase n=2 Tax=Firmicutes RepID=H1B8U2_9FIRM
CTP synthase
L2_031_030G1_scaffold_228_18
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(18754..20184)
DNA (1431bp) protein (477aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AS05_9FIRM
L2_031_030G1_scaffold_228_19
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20223..20930)
DNA (708bp) protein (236aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=2 Tax=Erysipelotrichaceae RepID=H1AS04_9FIRM
L2_031_030G1_scaffold_228_20
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21251..22066
DNA (816bp) protein (272aa)
Mur ligase middle domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LPD8_9CLOT
Mur ligase middle domain protein {ECO:0000313|EMBL:EFR39334.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
UDP-N-acetylmuramyl tripeptide synthase
Displaying 20 items

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