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L2_031_030G1_scaffold_238

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_238_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(81..302)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UEN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN43350.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_031_030G1_scaffold_238_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(327..1025)
DNA (699bp) protein (233aa)
Response regulator receiver domain protein n=3 Tax=Lachnospiraceae RepID=A7B873_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15558.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Response regulator of the LytR/AlgR family
L2_031_030G1_scaffold_238_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1215..1355
DNA (141bp) protein (47aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TVK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67339.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_031_030G1_scaffold_238_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1370..2149
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=R5TNH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67338.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
HD domain.
L2_031_030G1_scaffold_238_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2157..2768)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UEM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN43354.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
nucleoside recognition domain containing protein
L2_031_030G1_scaffold_238_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2772..4526)
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8E2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN75825.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_031_030G1_scaffold_238_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4634..5164
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67335.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Uncharacterized membrane protein
L2_031_030G1_scaffold_238_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5221..5880
DNA (660bp) protein (220aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVK1_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ67334.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_031_030G1_scaffold_238_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5946..6791)
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Ribosomal RNA small subunit methyltransferase I n=2 Tax=Lachnospiraceae RepID=F7K1T1_9FIRM
conserved hypothetical protein TIGR00096
L2_031_030G1_scaffold_238_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6813..7511)
DNA (699bp) protein (233aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5UEM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67332.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted O-methyltransferase
L2_031_030G1_scaffold_238_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7501..8406)
DNA (906bp) protein (302aa)
PSP1 C-terminal domain protein n=4 Tax=Clostridiales RepID=A7B8D7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ67331.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Uncharacterized homolog of PSP1
L2_031_030G1_scaffold_238_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8411..9406)
DNA (996bp) protein (332aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5TNU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN43361.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_031_030G1_scaffold_238_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9539..10624)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BL98_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15547.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_031_030G1_scaffold_238_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10644..11366)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67328.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_031_030G1_scaffold_238_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11359..12870)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B8D2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43365.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_031_030G1_scaffold_238_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12860..14161)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67325.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_031_030G1_scaffold_238_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14227..15063)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67324.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_031_030G1_scaffold_238_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15079..15960)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67323.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
binding-protein-dependent transport system membrane protein
L2_031_030G1_scaffold_238_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15950..17233)
DNA (1284bp) protein (428aa)
Multidrug efflux pump VmrA n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UEK9_9FIRM
Multidrug efflux pump VmrA {ECO:0000313|EMBL:CCZ67322.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_031_030G1_scaffold_238_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17389..17982)
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B8C7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43370.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Guanylate kinase
L2_031_030G1_scaffold_238_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17975..19399)
DNA (1425bp) protein (475aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BK97_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15539.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Displaying 21 items

View Taxonomy