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L2_031_030G1_scaffold_267

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_267_1
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..289
DNA (288bp) protein (96aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LVP6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85195.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L2_031_030G1_scaffold_267_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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523..1677
DNA (1155bp) protein (385aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=4 Tax=Firmicutes RepID=R6UT38_9FIRM
L2_031_030G1_scaffold_267_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1705..2244
DNA (540bp) protein (180aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=7 Tax=Firmicutes RepID=E4LVP4_9CLOT
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:ENY88183.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_031_030G1_scaffold_267_4
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2265..4289
DNA (2025bp) protein (675aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=5 Tax=Firmicutes RepID=E4LVP3_9CLOT
L2_031_030G1_scaffold_267_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4743..6215
DNA (1473bp) protein (491aa)
PTS system, Fru family, IIB component domain protein {ECO:0000313|EMBL:EQJ51962.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQJ51962.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
fruA; PTS system, fructose subfamily, IIA component domain protein (EC:2.7.1.69)
Phosphotransferase system, EIIC n=5 Tax=Firmicutes RepID=E4LVP2_9CLOT
L2_031_030G1_scaffold_267_6
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6228..6680
DNA (453bp) protein (151aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=4 Tax=Firmicutes RepID=E4LVP1_9CLOT
PTS system fructose subfamily IIA component {ECO:0000313|EMBL:CDC85190.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
fruA; PTS system, fructose subfamily, IIA component domain protein
L2_031_030G1_scaffold_267_7
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6694..9303
DNA (2610bp) protein (870aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AXE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85189.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L2_031_030G1_scaffold_267_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9336..10139
DNA (804bp) protein (268aa)
SIS domain protein n=5 Tax=Firmicutes RepID=E4LVN9_9CLOT
Iron dicitrate transport regulator FecR {ECO:0000313|EMBL:KGJ54129.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
SIS domain protein
L2_031_030G1_scaffold_267_9
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10386..11759
DNA (1374bp) protein (458aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase gmuD n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VV33_9FIRM
6-phospho-beta-glucosidase gmuD {ECO:0000313|EMBL:EGX72673.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
L2_031_030G1_scaffold_267_10
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11759..12655
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VV32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88176.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
ROK family protein
L2_031_030G1_scaffold_267_11
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13129..13965
DNA (837bp) protein (279aa)
AraC-like ligand binding domain protein n=6 Tax=Firmicutes RepID=E4LVN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88175.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L2_031_030G1_scaffold_267_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13958..14872
DNA (915bp) protein (305aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AXD9_9FIRM
EamA-like transporter family protein {ECO:0000313|EMBL:EQJ51970.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_030G1_scaffold_267_13
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14842..15261
DNA (420bp) protein (140aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LVN2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37217.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_031_030G1_scaffold_267_14
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15806..15943
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AXD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFP59885.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
transcriptional regulator, XRE family
L2_031_030G1_scaffold_267_15
Rhipicephalus pulchellus, Rhipicephalus, Ixodida, Acari, Arthropoda, Metazoa

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16132..16344
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z8_9FIRM
Putative eukaryotic translation initiation factor 3 subunit 10 {ECO:0000313|EMBL:JAA63409.1}; Flags: Fragment;; TaxID=72859 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Rhipicephalus.;" source="Rhipicephalus pulchellus.;"
restriction enzyme BgcI subunit alpha
Displaying 15 items

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