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L2_031_030G1_scaffold_272

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_272_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(851..1171)
DNA (321bp) protein (107aa)
UPI0003A875C2 related cluster n=1 Tax=unknown RepID=UPI0003A875C2
Branched-chain amino acid transport {ECO:0000313|EMBL:ETI87539.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
branched-chain amino acid transport
L2_031_030G1_scaffold_272_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1190..1909)
DNA (720bp) protein (240aa)
UPI0003D60DBE related cluster n=1 Tax=unknown RepID=UPI0003D60DBE
AzlC family protein {ECO:0000313|EMBL:ETI87540.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
AzlC family protein
L2_031_030G1_scaffold_272_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1946..2551)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IRA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42804.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
putative hydrolase
L2_031_030G1_scaffold_272_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2698..4134)
DNA (1437bp) protein (479aa)
Amidohydrolase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDF1_9FIRM
Amidohydrolase {ECO:0000313|EMBL:EEF66008.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
amidohydrolase
L2_031_030G1_scaffold_272_5
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4369..5178
DNA (810bp) protein (270aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FSV3_9FIRM
metallo-beta-lactamase family protein
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:AKA68992.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L2_031_030G1_scaffold_272_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5326..5643
DNA (318bp) protein (106aa)
UPI0003D66F16 related cluster n=1 Tax=unknown RepID=UPI0003D66F16
ArsR family transcriptional regulator {ECO:0000313|EMBL:KHD17229.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ArsR family transcriptional regulator
L2_031_030G1_scaffold_272_7
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5786..6190
DNA (405bp) protein (135aa)
Arsenate reductase {ECO:0000313|EMBL:KJZ85456.1}; EC=1.20.4.1 {ECO:0000313|EMBL:KJZ85456.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z635_CLOBU
protein tyrosine phosphatase
L2_031_030G1_scaffold_272_8
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6222..7460
DNA (1239bp) protein (413aa)
UPI0003D5E8DA related cluster n=1 Tax=unknown RepID=UPI0003D5E8DA
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pump {ECO:0000313|EMBL:KJZ84249.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
MATE efflux family protein
L2_031_030G1_scaffold_272_9
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7854..8441)
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GSU7_CLOLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK14517.1}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).;"
L2_031_030G1_scaffold_272_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8776..8943)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FQH2_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:AJG99047.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L2_031_030G1_scaffold_272_11
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9033..9188)
DNA (156bp) protein (52aa)
Putative zinc-binding domain-containing protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJ64_9CLOT
putative zinc-binding domain-containing protein
Putative zinc-binding domain-containing protein {ECO:0000313|EMBL:AGF56363.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_031_030G1_scaffold_272_12
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9341..10105)
DNA (765bp) protein (255aa)
phosphoglycerate mutase (EC:5.4.2.4)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U6V3_ETHHY
L2_031_030G1_scaffold_272_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10203..10559)
DNA (357bp) protein (119aa)
Heavy metal transport/detoxification protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7LXC4_9CLOT
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:EHI96786.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
heavy metal transport/detoxification protein
L2_031_030G1_scaffold_272_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10734..10895)
DNA (162bp) protein (54aa)
UPI0003D67CDB related cluster n=1 Tax=unknown RepID=UPI0003D67CDB
Uncharacterized protein {ECO:0000313|EMBL:ETI87681.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L2_031_030G1_scaffold_272_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11097..13247)
DNA (2151bp) protein (717aa)
UPI0003D686CE related cluster n=1 Tax=unknown RepID=UPI0003D686CE
Ferrous iron transport protein B {ECO:0000313|EMBL:KJZ84085.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
feoB; ferrous iron transport protein B
L2_031_030G1_scaffold_272_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13382..13603)
DNA (222bp) protein (74aa)
Ferrous iron transport protein A n=3 Tax=Clostridium butyricum RepID=C4IBY1_CLOBU
FeoA family protein
Iron transporter FeoA {ECO:0000313|EMBL:KHD14140.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_031_030G1_scaffold_272_17
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13718..13927)
DNA (210bp) protein (70aa)
FeoA family protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M128_CLOB8
FeoA family protein
FeoA family protein {ECO:0000313|EMBL:AJH01238.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L2_031_030G1_scaffold_272_18
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14186..15469)
DNA (1284bp) protein (428aa)
Chloride transporter, ClC family n=2 Tax=Turicibacter RepID=D4W810_9FIRM
putative voltage gated chloride channel family
Putative voltage gated chloride channel family {ECO:0000313|EMBL:CDM69667.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_031_030G1_scaffold_272_19
unknown

Not on your lists

15798..16016
DNA (219bp) protein (73aa)

This feature has no annotations

L2_031_030G1_scaffold_272_20
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16009..16452
DNA (444bp) protein (148aa)
Putative membrane-associated ATP-binding domain protein n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GPH9_CLOLD
membrane-associated ATP-binding domain-containing protein
Putative membrane-associated ATP-binding domain protein {ECO:0000313|EMBL:ADK16057.1}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).;"
L2_031_030G1_scaffold_272_21
unknown

Not on your lists

16482..16577
DNA (96bp) protein (32aa)

This feature has no annotations

L2_031_030G1_scaffold_272_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16795..17439)
DNA (645bp) protein (215aa)
Transcriptional regulator, Crp/Fnr family n=2 Tax=Clostridium botulinum B RepID=U4PL06_CLOBO
CarD family transcriptional regulator
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACD22868.1}; Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:CDH90886.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_031_030G1_scaffold_272_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17958..19658)
DNA (1701bp) protein (567aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JKE0_CLOBU
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KHD17239.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
pyridine nucleotide-disulfide oxidoreductase family protein
L2_031_030G1_scaffold_272_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19749..20069)
DNA (321bp) protein (107aa)
Rhodanesen domain protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UTQ9_CLOBO
Rhodanesen domain protein {ECO:0000313|EMBL:EES50611.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
rhodanese domain protein
L2_031_030G1_scaffold_272_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20323..21336)
DNA (1014bp) protein (338aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
trpS; tryptophan--tRNA ligase TrpS (EC:6.1.1.2)
Tryptophan--tRNA ligase n=2 Tax=Clostridium butyricum RepID=B1QZR4_CLOBU
L2_031_030G1_scaffold_272_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21699..21941)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZ00_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX44866.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_030G1_scaffold_272_27
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22153..22587)
DNA (435bp) protein (145aa)
Universal stress protein UspA-like protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TU01_9CLOT
Universal stress protein UspA-like protein {ECO:0000313|EMBL:EKQ50237.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
universal stress protein domain-containing protein, UspA family
L2_031_030G1_scaffold_272_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22755..23591)
DNA (837bp) protein (279aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
Probable endonuclease 4 n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UQI7_CLOBO
AP endonuclease, family 2
L2_031_030G1_scaffold_272_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23730..24632)
DNA (903bp) protein (301aa)
HD hydrolase superfamily protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V156_CLOBA
HD hydrolase superfamily protein
Phosphohydrolase {ECO:0000313|EMBL:KIL08919.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_031_030G1_scaffold_272_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24990..25556)
DNA (567bp) protein (189aa)
P-loop ATPase n=4 Tax=Clostridium butyricum RepID=B1QXY4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35726.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
P-loop ATPase
Displaying items 1-30 of 37 in total

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