ggKbase home page

L2_031_030G1_scaffold_45_20

Organism: L2_031_030G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 15
Location: comp(20781..21560)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=3 Tax=Firmicutes RepID=E4LZR2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 259.0
  • Bit_score: 503
  • Evalue 1.20e-139
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 259.0
  • Bit_score: 503
  • Evalue 1.70e-139
sigG; sporulation sigma factor SigG similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 258.0
  • Bit_score: 297
  • Evalue 2.80e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. HGF2 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 780
ATGAGTCGTTATAAAGTAGAAATCAGCGGTATCAATACCGCACAGTTAAAGGTCTTGACAAATGCAGAAATGAAGGAGCTGTTTGTGAAGCTCCAGCAGGGCGATGAAAGTGCCAAGGAAACACTGATCAATGGAAATCTGAAGCTGGTGCTGTCCATTGTGCAGCGCTTTTCCAATCGCTGTGAAAATATGGATGATCTGTTTCAGGTTGGCTGCATCGGGCTTGTGAAGTCCATCGACAATTTTGATCTGAAGCATGAAGTGCGCTTTTCCACCTATGCGGTACCGATGATCATGGGTGAAATCAAACGCTATCTGCGCGATAATCAGGTAATCCGGGTATCCCGCCATTTAAAGGATCTGGCGTATCGGGCCTTCAAGCTGAAGGAGGAGTATGTACATAAGCATCAAAAGGAGCCAAGTGTTTCCTGGCTTGCCCAGCAGCTGGAGGTTAAGGAAAAGGATATCGTGGATGCACTGGATTCCACACAGAGTGTGCTTTCCATCTTTGAACCGGTATACAATTCGGACGGAGATGAGCTGTTTTTGCTGGATCAGATCAAGGATGACAAGGATGAAATCGAGCGTCTGAACAATTTGATGGCGTTAAAGCGCAGTCTGACACGCTTAAAGGGGAAGGAGCTGGATATCATACAGAAACGCTATTATCAGGATATGACGCAGACAGAGATTGCCGGAGAGCTGGGCATCTCGCAGGCACAGGTGTCACGTCTGGAAAAAAACGCCATTGCAGTTTTGAAAAAAGAATTTGATTCCTAG
PROTEIN sequence
Length: 260
MSRYKVEISGINTAQLKVLTNAEMKELFVKLQQGDESAKETLINGNLKLVLSIVQRFSNRCENMDDLFQVGCIGLVKSIDNFDLKHEVRFSTYAVPMIMGEIKRYLRDNQVIRVSRHLKDLAYRAFKLKEEYVHKHQKEPSVSWLAQQLEVKEKDIVDALDSTQSVLSIFEPVYNSDGDELFLLDQIKDDKDEIERLNNLMALKRSLTRLKGKELDIIQKRYYQDMTQTEIAGELGISQAQVSRLEKNAIAVLKKEFDS*