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L2_031_030G1_scaffold_45

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_45_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..2024)
DNA (2022bp) protein (674aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=3 Tax=Firmicutes RepID=E4LZT0_9CLOT
L2_031_030G1_scaffold_45_2
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2037..3077)
DNA (1041bp) protein (347aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=5 Tax=Firmicutes RepID=E4LZS9_9CLOT
L2_031_030G1_scaffold_45_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3392..4447)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=G1VN09_9FIRM
Twitching motility family protein {ECO:0000313|EMBL:EQJ59016.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
type IV pilus retraction protein PilT
L2_031_030G1_scaffold_45_4
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4459..6132)
DNA (1674bp) protein (558aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VN08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX76293.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
type IV pilus assembly protein PilB
L2_031_030G1_scaffold_45_5
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6323..7639)
DNA (1317bp) protein (439aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B9H9_9FIRM
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EHO28545.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
putative prepilin-type N-cleavage/methylation domain protein
L2_031_030G1_scaffold_45_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7661..8590)
DNA (930bp) protein (310aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=5 Tax=Firmicutes RepID=E4LZS5_9CLOT
Prepilin-type N-terminal cleavage/methylation domain protein {ECO:0000313|EMBL:EQJ59019.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_030G1_scaffold_45_7
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8608..9651)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1ASP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFR35746.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_031_030G1_scaffold_45_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9670..10176)
DNA (507bp) protein (169aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=G1VN04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ59021.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_030G1_scaffold_45_9
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10265..11002)
DNA (738bp) protein (246aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LZS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85455.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_031_030G1_scaffold_45_10
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11013..11924)
DNA (912bp) protein (304aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1ASP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85792.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
pilM; pilus assembly protein ATPase PilM
L2_031_030G1_scaffold_45_11
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11937..13133)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VN01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY85453.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
putative type II secretion pathway protein XcpS
L2_031_030G1_scaffold_45_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13158..13925)
DNA (768bp) protein (256aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
pilD; type IV prepilin-like leader peptidase PilD (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=5 Tax=Firmicutes RepID=E4LZR9_9CLOT
L2_031_030G1_scaffold_45_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13998..14444)
DNA (447bp) protein (149aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=5 Tax=Firmicutes RepID=E4LZR8_9CLOT
Prepilin-type N-terminal cleavage/methylation domain protein {ECO:0000313|EMBL:EQJ59026.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_030G1_scaffold_45_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14829..15560)
DNA (732bp) protein (244aa)
ysgA; putative tRNA/rRNA methyltransferase YsgA (EC:2.1.1.-)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1ASP8_9FIRM
SpoU rRNA Methylase family protein {ECO:0000313|EMBL:EQJ59027.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_030G1_scaffold_45_15
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15758..18484)
DNA (2727bp) protein (909aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Isoleucine--tRNA ligase n=2 Tax=Erysipelotrichaceae RepID=H1ASP9_9FIRM
ileS; isoleucyl-tRNA synthetase
L2_031_030G1_scaffold_45_16
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18727..19191)
DNA (465bp) protein (155aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1ASQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85798.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
cell-division initiation protein DivIVA
L2_031_030G1_scaffold_45_17
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19206..19958)
DNA (753bp) protein (251aa)
S4 domain protein n=7 Tax=Firmicutes RepID=E4LZR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO28557.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L2_031_030G1_scaffold_45_18
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19962..20363)
DNA (402bp) protein (134aa)
Cell division protein SepF n=8 Tax=Firmicutes RepID=E2SR68_9FIRM
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
sepF; cell division protein SepF
L2_031_030G1_scaffold_45_19
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20490..20693)
DNA (204bp) protein (68aa)
Sporulation protein, YlmC/YmxH family n=7 Tax=Firmicutes RepID=E4LZR3_9CLOT
Sporulation protein, YlmC/YmxH family {ECO:0000313|EMBL:EFR35845.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_031_030G1_scaffold_45_20
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20781..21560)
DNA (780bp) protein (260aa)
RNA polymerase sigma factor n=3 Tax=Firmicutes RepID=E4LZR2_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
sigG; sporulation sigma factor SigG
L2_031_030G1_scaffold_45_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21795..22499)
DNA (705bp) protein (235aa)
RNA polymerase sigma factor n=8 Tax=Firmicutes RepID=E2SR65_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
RNA polymerase sigma-35 factor
L2_031_030G1_scaffold_45_22
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22499..23236)
DNA (738bp) protein (246aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1ASQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85804.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_031_030G1_scaffold_45_23
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23338..23514)
DNA (177bp) protein (59aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LZQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85805.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_031_030G1_scaffold_45_24
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24030..25220)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LZQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR35848.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_031_030G1_scaffold_45_25
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25328..25819)
DNA (492bp) protein (164aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Phosphodiesterase family protein n=7 Tax=Firmicutes RepID=E4LZQ6_9CLOT
phosphoesterase, MJ0936 family
L2_031_030G1_scaffold_45_26
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25883..26863)
DNA (981bp) protein (327aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LZQ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR35756.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
gerM; cortex hydrolysis/stage II sporulation protein
L2_031_030G1_scaffold_45_27
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26929..28056)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1ASR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85809.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
D-alanyl-D-alanine carboxypeptidase
L2_031_030G1_scaffold_45_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28115..28714)
DNA (600bp) protein (200aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1ASR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ59043.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_030G1_scaffold_45_29
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29328..31106)
DNA (1779bp) protein (593aa)
UvrABC system protein C n=2 Tax=Erysipelotrichaceae RepID=H1ASR3_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Excinuclease ABC subunit C
L2_031_030G1_scaffold_45_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31106..33439)
DNA (2334bp) protein (778aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Endonuclease MutS2 n=2 Tax=Erysipelotrichaceae RepID=H1ASR4_9FIRM
mutS2; DNA mismatch repair protein MutS2
Displaying items 1-30 of 84 in total

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