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L2_031_030G1_scaffold_115

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_115_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(193..1050)
DNA (858bp) protein (286aa)
DpnII restriction endonuclease. (EC:3.1.21.4)
Type II restriction enzyme n=8 Tax=Clostridium RepID=N9WNS9_9CLOT
Type II restriction enzyme {ECO:0000313|EMBL:ENZ58200.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_030G1_scaffold_115_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1054..1896)
DNA (843bp) protein (281aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9X6M5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58201.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Restriction endonuclease
L2_031_030G1_scaffold_115_3
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1880..2695)
DNA (816bp) protein (272aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Modification methylase LlaDCHIB n=8 Tax=Clostridium RepID=G5I2W8_9CLOT
adenine-specific DNA-methyltransferase
L2_031_030G1_scaffold_115_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2712..3545)
DNA (834bp) protein (278aa)
DNA adenine methylase n=7 Tax=Clostridium clostridioforme RepID=N9VLI7_9CLOT
DNA adenine methylase {ECO:0000313|EMBL:ENZ58203.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
DNA adenine methylase
L2_031_030G1_scaffold_115_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3673..4233)
DNA (561bp) protein (187aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9WPG0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58204.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_030G1_scaffold_115_6
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4544..4777
DNA (234bp) protein (78aa)
XRE family transcriptional regulator n=10 Tax=Clostridium RepID=M1M1Q1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25729.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Helix-turn-helix.
L2_031_030G1_scaffold_115_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4781..5308
DNA (528bp) protein (176aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9X6M1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58206.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_030G1_scaffold_115_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5406..5540)
DNA (135bp) protein (45aa)
TnpV protein n=1 Tax=Clostridium clostridioforme RepID=M1LCN2_9CLOT
TnpV protein {ECO:0000313|EMBL:AGF50190.1}; TaxID=1531 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme.;"
hypothetical protein
L2_031_030G1_scaffold_115_9
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5603..7099)
DNA (1497bp) protein (499aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=5 Tax=Clostridium RepID=N9XYK6_9CLOT
L2_031_030G1_scaffold_115_10
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7124..7606)
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=15 Tax=Clostridium RepID=G5HCK7_9CLOT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
GreA/GreB family elongation factor
L2_031_030G1_scaffold_115_11
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7712..8677)
DNA (966bp) protein (322aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
tRNA-dihydrouridine synthase n=9 Tax=Clostridium RepID=G5I326_9CLOT
tRNA-U20-dihydrouridine synthase
L2_031_030G1_scaffold_115_12
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8678..9028)
DNA (351bp) protein (117aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9WNT6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63348.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L2_031_030G1_scaffold_115_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9111..10085)
DNA (975bp) protein (325aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
6-phosphofructokinase n=10 Tax=Clostridium RepID=G5I328_9CLOT
6-phosphofructokinase
L2_031_030G1_scaffold_115_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10178..13663)
DNA (3486bp) protein (1162aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=8 Tax=Clostridium clostridioforme RepID=N9VLB0_9CLOT
L2_031_030G1_scaffold_115_15
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13796..14050)
DNA (255bp) protein (85aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8RX64_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61414.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Phosphotransferase System HPr (HPr) Family
L2_031_030G1_scaffold_115_16
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14172..15149)
DNA (978bp) protein (326aa)
Putative sporulation transcription regulator WhiA n=8 Tax=Clostridium RepID=G5I331_9CLOT
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_030G1_scaffold_115_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15155..16024)
DNA (870bp) protein (290aa)
UPF0042 nucleotide-binding protein HMPREF9467_03165 n=9 Tax=Clostridium RepID=G5I332_9CLOT
Nucleotide-binding protein HMPREF1083_03763 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_030G1_scaffold_115_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16061..16972)
DNA (912bp) protein (304aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=6 Tax=Clostridium clostridioforme RepID=N9VKN6_9CLOT
L2_031_030G1_scaffold_115_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17000..17926)
DNA (927bp) protein (309aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr kinase/phosphorylase; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
HPr kinase/phosphorylase n=8 Tax=Clostridium clostridioforme RepID=G5I334_9CLOT
HPr kinase
L2_031_030G1_scaffold_115_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18011..19954)
DNA (1944bp) protein (648aa)
UvrABC system protein C n=6 Tax=Clostridium clostridioforme RepID=N9X5Q2_9CLOT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
excinuclease ABC subunit C
L2_031_030G1_scaffold_115_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20013..21380)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=5 Tax=Clostridium clostridioforme RepID=N9WPH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61097.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_030G1_scaffold_115_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21754..23373)
DNA (1620bp) protein (540aa)
Fructuronate reductase n=8 Tax=Clostridium clostridioforme RepID=N9WNU4_9CLOT
Fructuronate reductase {ECO:0000313|EMBL:ENZ07346.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
mannitol dehydrogenase
L2_031_030G1_scaffold_115_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23592..23732)
DNA (141bp) protein (47aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WWQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ07345.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_031_030G1_scaffold_115_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24600..25421)
DNA (822bp) protein (274aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9X5P7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61093.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
cobalt ABC transporter ATP-binding protein
L2_031_030G1_scaffold_115_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25418..26272)
DNA (855bp) protein (285aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WPH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ07342.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
cobalt ABC transporter ATP-binding protein
L2_031_030G1_scaffold_115_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26260..27036)
DNA (777bp) protein (259aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9WNU6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61091.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
cobalt ABC transporter permease
L2_031_030G1_scaffold_115_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27048..27662)
DNA (615bp) protein (205aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9VKM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61090.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_030G1_scaffold_115_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27659..28423)
DNA (765bp) protein (255aa)
udp1; uridine phosphorylase Udp (EC:2.4.2.3)
Purine nucleoside phosphorylase n=9 Tax=Clostridium RepID=N9VLA0_9CLOT
Purine nucleoside phosphorylase {ECO:0000313|EMBL:ENZ61089.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_030G1_scaffold_115_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28434..29108)
DNA (675bp) protein (225aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9X5P2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61088.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Cyclic nucleotide-binding protein
L2_031_030G1_scaffold_115_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29319..30767)
DNA (1449bp) protein (483aa)
beta-fructofuranosidase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=6 Tax=Clostridium clostridioforme RepID=N9WPI0_9CLOT
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:ENZ61087.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Displaying items 1-30 of 43 in total

View Taxonomy