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L2_031_030G1_scaffold_155

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_030G1_scaffold_155_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

280..1173
DNA (894bp) protein (298aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9XJB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12163.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
binding-protein-dependent transporters inner membrane component
L2_031_030G1_scaffold_155_2
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1170..1541
DNA (372bp) protein (124aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9X8I2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24732.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L-arabinose transport system permease
L2_031_030G1_scaffold_155_3
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1538..2002
DNA (465bp) protein (155aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9WQC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24731.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
lactose ABC transporter permease
L2_031_030G1_scaffold_155_4
unknown

Not on your lists

comp(1828..2385)
DNA (558bp) protein (186aa)

This feature has no annotations

L2_031_030G1_scaffold_155_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2401..2745)
DNA (345bp) protein (115aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9VZP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12160.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_031_030G1_scaffold_155_6
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3019..5067
DNA (2049bp) protein (683aa)
Phosphoesterase n=10 Tax=Clostridium RepID=N9XJB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64223.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
phosphoesterase RecJ domain-containing protein
L2_031_030G1_scaffold_155_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5112..5558
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=10 Tax=Clostridium RepID=G5HXV6_9CLOT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
LSU ribosomal protein L9P
L2_031_030G1_scaffold_155_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5630..6988
DNA (1359bp) protein (453aa)
primary replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=10 Tax=Clostridium RepID=G5HXV7_9CLOT
Replicative DNA helicase {ECO:0000313|EMBL:ENZ12157.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_031_030G1_scaffold_155_9
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7082..7750
DNA (669bp) protein (223aa)
MerR family transcriptional regulator n=9 Tax=Clostridium RepID=N9VZ93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64220.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
MerR family transcriptional regulator
L2_031_030G1_scaffold_155_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7978..9579
DNA (1602bp) protein (534aa)
Peptidoglycan-binding protein n=9 Tax=Clostridium RepID=N9VZN6_9CLOT
Peptidoglycan-binding protein {ECO:0000313|EMBL:ENZ12155.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
peptidoglycan-binding domain-containing protein
L2_031_030G1_scaffold_155_11
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9623..10318
DNA (696bp) protein (232aa)
Uncharacterized protein n=17 Tax=Clostridium RepID=A8RIX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64218.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_031_030G1_scaffold_155_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10327..12705
DNA (2379bp) protein (793aa)
Integral membrane sensor signal transduction histidine kinase n=10 Tax=Clostridium RepID=N9X8H2_9CLOT
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ENZ12153.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
integral membrane sensor signal transduction histidine kinase
L2_031_030G1_scaffold_155_13
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12801..13550)
DNA (750bp) protein (250aa)
Aminoglycoside phosphotransferase n=10 Tax=Clostridium RepID=N9WQB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24721.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
aminoglycoside phosphotransferase
L2_031_030G1_scaffold_155_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13711..15639)
DNA (1929bp) protein (643aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=9 Tax=Clostridium RepID=G5HXW3_9CLOT
L2_031_030G1_scaffold_155_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15641..16981)
DNA (1341bp) protein (447aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Alpha amylase n=8 Tax=Clostridium RepID=N9VZN0_9CLOT
Glycosidases
L2_031_030G1_scaffold_155_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17050..17304)
DNA (255bp) protein (85aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9XJA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12149.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_031_030G1_scaffold_155_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17400..17753)
DNA (354bp) protein (118aa)
ArsR family transcriptional regulator n=9 Tax=Clostridium RepID=N9X8G9_9CLOT
ArsR family transcriptional regulator {ECO:0000313|EMBL:ENZ12148.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ArsR family transcriptional regulator
L2_031_030G1_scaffold_155_18
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18083..18601
DNA (519bp) protein (173aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WQB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24716.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
peptidase A24A prepilin type IV
L2_031_030G1_scaffold_155_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18658..19662
DNA (1005bp) protein (335aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VZ82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12146.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_031_030G1_scaffold_155_20
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19712..20911
DNA (1200bp) protein (400aa)
Type II secretion system protein n=8 Tax=Clostridium RepID=N9VZM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24714.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
type II secretion system protein E
L2_031_030G1_scaffold_155_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20850..21710
DNA (861bp) protein (287aa)
Tight adherence protein B n=8 Tax=Clostridium RepID=N9XJ93_9CLOT
Tight adherence protein B {ECO:0000313|EMBL:ENZ65460.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
type II secretion system F domain-containing protein
L2_031_030G1_scaffold_155_22
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21718..22998
DNA (1281bp) protein (427aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9X8G3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24712.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_030G1_scaffold_155_23
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23017..23196
DNA (180bp) protein (60aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WQA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24711.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_030G1_scaffold_155_24
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23196..25175
DNA (1980bp) protein (660aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VZ74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24710.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_030G1_scaffold_155_25
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25231..26226
DNA (996bp) protein (332aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9VZM1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24709.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_030G1_scaffold_155_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26248..26799
DNA (552bp) protein (184aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9XJ86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65465.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_030G1_scaffold_155_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26847..27188
DNA (342bp) protein (114aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9X8F9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65466.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L2_031_030G1_scaffold_155_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27178..28629
DNA (1452bp) protein (484aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WQA7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12036.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
FOG: FHA domain
L2_031_030G1_scaffold_155_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28809..29429
DNA (621bp) protein (207aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VZ70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65468.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
rhomboid family protein
L2_031_030G1_scaffold_155_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29472..29888
DNA (417bp) protein (139aa)
Cell cycle regulation histidine triad (HIT) protein n=10 Tax=Clostridium RepID=N9VZL7_9CLOT
Cell cycle regulation histidine triad (HIT) protein {ECO:0000313|EMBL:ENZ12034.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Displaying items 1-30 of 52 in total

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