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L2_031_061G1_scaffold_16

Search features with annotation key words

Displaying items 1-30 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_061G1_scaffold_16_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..438)
DNA (438bp) protein (146aa)
Mate efflux family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JKD7_CLOBU
Mate efflux family protein {ECO:0000313|EMBL:EEP52898.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
MATE efflux family protein
L2_031_061G1_scaffold_16_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(533..736)
DNA (204bp) protein (68aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QV38_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53293.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_031_061G1_scaffold_16_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(840..1922)
DNA (1083bp) protein (361aa)
Arsenical-resistance protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K5M5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86482.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
arsenic resistance protein
L2_031_061G1_scaffold_16_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1970..2374)
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z635_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86836.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
protein tyrosine phosphatase
L2_031_061G1_scaffold_16_5
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2430..4178)
DNA (1749bp) protein (583aa)
arsA; arsenical pump-driving ATPase ArsA (EC:3.6.3.16)
Arsenic transporter ATPase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FQQ3_CLOPA
Arsenic transporter ATPase {ECO:0000313|EMBL:ETD65747.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_031_061G1_scaffold_16_6
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4254..4691)
DNA (438bp) protein (146aa)
Arsenic resistance operon repressor n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FVX5_CLOPA
Arsenic resistance operon repressor {ECO:0000313|EMBL:ETD68315.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
arsenical resistance operon trans-acting repressor ArsD
L2_031_061G1_scaffold_16_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4767..5084)
DNA (318bp) protein (106aa)
UPI0003D66F16 related cluster n=1 Tax=unknown RepID=UPI0003D66F16
ArsR family transcriptional regulator {ECO:0000313|EMBL:KHD17229.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ArsR family transcriptional regulator
L2_031_061G1_scaffold_16_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5205..5366)
DNA (162bp) protein (54aa)
Glycosyl hydrolase, family 25 n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V2N2_CLOBA
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KHD14341.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
glycosyl hydrolase family protein
L2_031_061G1_scaffold_16_9
unknown

Not on your lists

comp(5363..5491)
DNA (129bp) protein (43aa)

This feature has no annotations

L2_031_061G1_scaffold_16_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5504..5713)
DNA (210bp) protein (70aa)
Toxin secretion/phage lysis holin n=2 Tax=Clostridium botulinum RepID=B1QBF4_CLOBO
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:EKN41242.1}; TaxID=1232189 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CFSAN001627.;"
toxin secretion/phage lysis holin
L2_031_061G1_scaffold_16_11
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6473..6655)
DNA (183bp) protein (61aa)
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F4Z6_CLOSG
RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:EHN13458.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
ECF subfamily RNA polymerase sigma-24 subunit
L2_031_061G1_scaffold_16_12
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6665..6790)
DNA (126bp) protein (42aa)
Putative uncharacterized protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F4Z5_CLOSG
Putative uncharacterized protein {ECO:0000313|EMBL:EHN13457.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
L2_031_061G1_scaffold_16_13
unknown

Not on your lists

comp(6807..6956)
DNA (150bp) protein (50aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002EE6F0D
L2_031_061G1_scaffold_16_14
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6994..8088)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T120_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ52683.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_031_061G1_scaffold_16_15
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8108..9127)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U8Z8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ52684.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_031_061G1_scaffold_16_16
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9066..10727)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TLT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ52685.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_031_061G1_scaffold_16_17
Dolosigranulum pigrum, Dolosigranulum, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11052..11903)
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Dolosigranulum pigrum ATCC 51524 RepID=H3NEC8_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EHR32793.1}; TaxID=883103 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Dolosigranulum.;" source="Dolosigranulum pigrum ATCC 51524.;"
methionine sulfoxide reductase A
L2_031_061G1_scaffold_16_18
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12069..13658)
DNA (1590bp) protein (530aa)
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EDU36723.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EDU36723.1};; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;"
hsdM; type I restriction-modification system, M subunit (EC:2.1.1.72)
Type I restriction-modification system, M subunit n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T556_CLOSG
L2_031_061G1_scaffold_16_19
Streptococcus sp. FF10, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13690..14904)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002D8D401
HsdS specificity protein of type I restriction-modification system {ECO:0000313|EMBL:CQR24368.1}; TaxID=1608583 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. FF10.;"
type I restriction modification DNA specificity domain protein
L2_031_061G1_scaffold_16_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15009..18218)
DNA (3210bp) protein (1070aa)
Type I site-specific restriction-modification system, R n=2 Tax=Clostridium botulinum B RepID=B2TLI6_CLOBB
type I site-specific restriction-modification system, R
Type I site-specific restriction-modification system, R {ECO:0000313|EMBL:ACD22359.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_031_061G1_scaffold_16_21
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18218..18790)
DNA (573bp) protein (191aa)
type I restriction endonuclease subunit M n=1 Tax=Clostridium tyrobutyricum RepID=UPI000371C9E0
Restriction endonuclease S subunits {ECO:0000313|EMBL:CDL90891.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
hypothetical protein
L2_031_061G1_scaffold_16_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19078..19596)
DNA (519bp) protein (173aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=A7B5S4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45454.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_031_061G1_scaffold_16_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19599..20771)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ56739.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_031_061G1_scaffold_16_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21345..22697)
DNA (1353bp) protein (451aa)
23S rRNA-methyltransferase {ECO:0000313|EMBL:EEP55477.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEP55477.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
RNA methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Clostridium butyricum RepID=B1R1C0_CLOBU
L2_031_061G1_scaffold_16_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22975..23379)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V0B7_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES50951.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L2_031_061G1_scaffold_16_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23399..24103)
DNA (705bp) protein (235aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=R0AG76_CLOBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJZ84431.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_031_061G1_scaffold_16_27
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24657..25334)
DNA (678bp) protein (226aa)
Competence protein ComEA-like protein with helix-hairpin-helix repeat region n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAD7_9CLOT
Competence protein ComEA-like protein with helix-hairpin-helix repeat region {ECO:0000313|EMBL:EKQ55129.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
helix-hairpin-helix repeat-containing competence protein ComEA
L2_031_061G1_scaffold_16_28
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25493..26728
DNA (1236bp) protein (412aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T5Z8_9CLOT
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:EKQ55128.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
Serine-type D-Ala-D-Ala carboxypeptidase
L2_031_061G1_scaffold_16_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26784..27935)
DNA (1152bp) protein (384aa)
Aspartate-semialdehyde dehydrogenase n=2 Tax=Clostridium butyricum RepID=M8KEX6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96007.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
aspartate-semialdehyde dehydrogenase
L2_031_061G1_scaffold_16_30
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28000..28965
DNA (966bp) protein (322aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LQS5_CLOB8
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABR32705.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Displaying items 1-30 of 130 in total

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