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L2_031_061G1_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_061G1_scaffold_35_1
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..876
DNA (876bp) protein (292aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EFR39701.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EFR39701.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
cell wall hydrolase lytN (EC:3.-.-.-)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium sp. HGF2 RepID=E4LND0_9CLOT
L2_031_061G1_scaffold_35_2
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

954..1637
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium innocuum 2959 RepID=N9WUE8_CLOIN
Uncharacterized protein {ECO:0000313|EMBL:ENY87101.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L2_031_061G1_scaffold_35_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1672..3111)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Clostridium innocuum 2959 RepID=N9V921_CLOIN
Uncharacterized protein {ECO:0000313|EMBL:ENY87100.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
AP2 domain.
L2_031_061G1_scaffold_35_4
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3123..3494)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=E4LNC5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR39674.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_031_061G1_scaffold_35_5
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3545..3727)
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae (miscellaneous) RepID=G1VXN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGJ54059.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
L2_031_061G1_scaffold_35_6
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3757..3993)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LNC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR39668.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_031_061G1_scaffold_35_7
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4166..4573)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VV88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88192.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_031_061G1_scaffold_35_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5048..6148)
DNA (1101bp) protein (367aa)
Glycosyltransferase, group 4 family n=5 Tax=Firmicutes RepID=E4LVQ5_9CLOT
Glycosyl transferase 4 family protein {ECO:0000313|EMBL:EQJ51947.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
tagO; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
L2_031_061G1_scaffold_35_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6171..7157)
DNA (987bp) protein (329aa)
Cell shape determining protein, MreB/Mrl family n=6 Tax=Firmicutes RepID=E2SRE5_9FIRM
Cell shape determining , MreB/Mrl family protein {ECO:0000313|EMBL:EQJ51946.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
MreB/Mrl family cell shape determining protein
L2_031_061G1_scaffold_35_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7419..8042)
DNA (624bp) protein (208aa)
Peptidase, M23 family n=6 Tax=Firmicutes RepID=E4LVQ7_9CLOT
Peptidase M23 family protein {ECO:0000313|EMBL:EQJ51945.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
spoIIQ; stage II sporulation protein SpoIIQ
L2_031_061G1_scaffold_35_11
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8091..9032)
DNA (942bp) protein (314aa)
Stage II sporulation protein D n=7 Tax=Firmicutes RepID=G1VV92_9FIRM
Stage II sporulation protein D {ECO:0000313|EMBL:ENY88196.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
stage II sporulation protein D
L2_031_061G1_scaffold_35_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9076..10656)
DNA (1581bp) protein (527aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B5P6_9FIRM
Response regulator {ECO:0000313|EMBL:EQJ51943.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
AraC family transcriptional regulator
L2_031_061G1_scaffold_35_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10662..12335)
DNA (1674bp) protein (558aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B5P5_9FIRM
HAMP domain protein {ECO:0000313|EMBL:EQJ51942.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
sensor histidine kinase
L2_031_061G1_scaffold_35_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12398..12601)
DNA (204bp) protein (68aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VV95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ51941.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Protein of unknown function (DUF1146).
L2_031_061G1_scaffold_35_15
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13329..14303
DNA (975bp) protein (325aa)
Uncharacterized protein n=3 Tax=unclassified Erysipelotrichaceae RepID=G1VV96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88200.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
AraC family transcriptional regulator
L2_031_061G1_scaffold_35_16
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14659..16173
DNA (1515bp) protein (505aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VV97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88201.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
putative transcriptional regulator
L2_031_061G1_scaffold_35_17
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16450..16920)
DNA (471bp) protein (157aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
3-dehydroquinate dehydratase, type ii (EC:4.2.1.10)
3-dehydroquinate dehydratase n=7 Tax=Firmicutes RepID=E4LVR5_9CLOT
L2_031_061G1_scaffold_35_18
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16931..17305)
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=E4LVR6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37211.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
glyoxalase/bleomycin resistance protein/dioxygenase
L2_031_061G1_scaffold_35_19
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17310..18266)
DNA (957bp) protein (319aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=4 Tax=Firmicutes RepID=E4LVR7_9CLOT
L2_031_061G1_scaffold_35_20
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18282..18740)
DNA (459bp) protein (153aa)
MaoC-like protein n=7 Tax=Firmicutes RepID=E4LVR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88205.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
MaoC like domain-containing protein
L2_031_061G1_scaffold_35_21
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18853..20436)
DNA (1584bp) protein (528aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Acetate CoA-transferase YdiF n=2 Tax=Firmicutes RepID=E4LVR9_9CLOT
acyl CoA:acetate/3-ketoacid CoA transferase
L2_031_061G1_scaffold_35_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20618..21490
DNA (873bp) protein (291aa)
Transcriptional regulator, AraC family n=5 Tax=Firmicutes RepID=E4LVS0_9CLOT
Cupin domain protein {ECO:0000313|EMBL:EQJ51930.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
AraC family bacterial regulatory protein
L2_031_061G1_scaffold_35_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21889..22737)
DNA (849bp) protein (283aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LVS1_9CLOT
NIF3 family protein {ECO:0000313|EMBL:EQJ51929.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_061G1_scaffold_35_24
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22759..23517)
DNA (759bp) protein (253aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LVS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37045.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
tyrosine phosphatase family protein
L2_031_061G1_scaffold_35_25
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23522..24322)
DNA (801bp) protein (267aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=G1VVA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88210.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_031_061G1_scaffold_35_26
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24425..24847)
DNA (423bp) protein (141aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=G1VVA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85276.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
phosphotransferase system, mannose/fructose-specific component IIA
L2_031_061G1_scaffold_35_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24844..26070)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LVS5_9CLOT
Neutral/alkaline non-lysosomal ceramidase family protein {ECO:0000313|EMBL:EQJ51925.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_061G1_scaffold_35_28
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26087..26887)
DNA (801bp) protein (267aa)
PTS system mannose/fructose/sorbose transporter subunit IID (EC:2.7.1.69)
PTS system mannose/fructose/sorbose family IID component n=7 Tax=Firmicutes RepID=E4LVS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88213.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_031_061G1_scaffold_35_29
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26880..27659)
DNA (780bp) protein (260aa)
PTS system sorbose-specific iic component n=7 Tax=Firmicutes RepID=E4LVS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88214.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system, mannose/fructose/sorbose family, IIC component
L2_031_061G1_scaffold_35_30
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27673..28152)
DNA (480bp) protein (160aa)
PTS system mannose/fructose/sorbose transporter subunit IIB (EC:2.7.1.69)
PTS system sorbose subfamily IIB component n=7 Tax=Firmicutes RepID=E4LVS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88215.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Displaying items 1-30 of 110 in total

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