ggKbase home page

L2_031_061G1_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_061G1_scaffold_56_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..256
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34336.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative surface layer protein
L2_031_061G1_scaffold_56_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

593..1159
DNA (567bp) protein (189aa)
Transcriptional regulator, LuxR family n=2 Tax=Clostridiales RepID=U2C4X9_9CLOT
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ERI79585.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
transcriptional regulator
L2_031_061G1_scaffold_56_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1170..2504
DNA (1335bp) protein (445aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34338.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
major facilitator family transporter
L2_031_061G1_scaffold_56_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2501..4027
DNA (1527bp) protein (509aa)
Carboxypeptidase Taq (EC:3.4.17.19)
Putative thermostable carboxypeptidase 1 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DDS0_9CLOT
Putative thermostable carboxypeptidase 1 {ECO:0000313|EMBL:ERI79587.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_031_061G1_scaffold_56_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4042..5310
DNA (1269bp) protein (423aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34340.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
major facilitator superfamily transporter
L2_031_061G1_scaffold_56_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5339..7282
DNA (1944bp) protein (648aa)
Xaa-Pro dipeptidyl-peptidase {ECO:0000256|SAAS:SAAS00048444}; EC=3.4.14.11 {ECO:0000256|SAAS:SAAS00048444};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
x-prolyl-dipeptidyl aminopeptidase (EC:3.4.14.11)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA72_9FIRM
L2_031_061G1_scaffold_56_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7465..8112)
DNA (648bp) protein (216aa)
autoinducer kinase n=1 Tax=Clostridium sporosphaeroides RepID=UPI000369BCCD
Uncharacterized protein {ECO:0000313|EMBL:KGF54198.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L-xylulose/3-keto-L-gulonate kinase
L2_031_061G1_scaffold_56_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8129..8581)
DNA (453bp) protein (151aa)
YhcH/YjgK/YiaL family protein n=2 Tax=Clostridiales RepID=U2DIU0_9CLOT
YhcH/YjgK/YiaL family protein {ECO:0000313|EMBL:ERI79591.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_031_061G1_scaffold_56_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8595..8855)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34343.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_031_061G1_scaffold_56_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8895..9821)
DNA (927bp) protein (309aa)
Transcriptional regulator, RpiR family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C4Z0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54200.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
RpiR family transcriptional regulator
L2_031_061G1_scaffold_56_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10063..11763
DNA (1701bp) protein (567aa)
ABC transporter, substrate-binding protein, family 5 n=2 Tax=Clostridiales RepID=U2DIU5_9CLOT
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:ERI79596.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
extracellular solute-binding protein, family 5
L2_031_061G1_scaffold_56_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11886..12854
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CA78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34347.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
dipeptide/oligopeptide/nickel ABC transporter permease
L2_031_061G1_scaffold_56_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12867..13805
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CA79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34348.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
dipeptide/oligopeptide/nickel ABC transporter permease
L2_031_061G1_scaffold_56_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13819..14847
DNA (1029bp) protein (343aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=2 Tax=Clostridiales RepID=H1CA80_9FIRM
Putative dipeptide ABC transporter, ATP-binding protein DppD {ECO:0000313|EMBL:ERI79599.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
L2_031_061G1_scaffold_56_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14844..15875
DNA (1032bp) protein (344aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA81_9FIRM
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:EHO34350.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
L2_031_061G1_scaffold_56_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15887..17509
DNA (1623bp) protein (541aa)
FAD binding domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DIV0_9CLOT
FAD binding domain protein {ECO:0000313|EMBL:ERI79601.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
pyridine nucleotide-disulfide oxidoreductase
L2_031_061G1_scaffold_56_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17500..18474
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34353.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Acetyl xylan esterase
L2_031_061G1_scaffold_56_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18471..19295
DNA (825bp) protein (275aa)
Acetyl xylan esterase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C6E0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54208.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Acetyl xylan esterase
L2_031_061G1_scaffold_56_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19304..20434
DNA (1131bp) protein (377aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34355.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative dehydrogenase
L2_031_061G1_scaffold_56_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20571..23849
DNA (3279bp) protein (1093aa)
BNR/Asp-box repeat protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C502_9CLOT
BNR/Asp-box repeat protein {ECO:0000313|EMBL:ERI79605.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
nanJ; exo-alpha-sialidase
L2_031_061G1_scaffold_56_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24411..25274)
DNA (864bp) protein (288aa)
TIGR03943 family protein n=2 Tax=Clostridiales RepID=H1CA88_9FIRM
TIGR03943 family protein {ECO:0000313|EMBL:ERI79607.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_031_061G1_scaffold_56_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25271..26884)
DNA (1614bp) protein (538aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34358.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_031_061G1_scaffold_56_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26885..27856)
DNA (972bp) protein (324aa)
CobW/P47K family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BN80_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54257.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
GTPase, G3E family
L2_031_061G1_scaffold_56_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27849..28694)
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54258.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ABC transporter
L2_031_061G1_scaffold_56_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28681..29433)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34361.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_031_061G1_scaffold_56_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29450..30460)
DNA (1011bp) protein (337aa)
ABC transporter, substrate-binding protein n=2 Tax=Clostridiales RepID=U2DDU4_9CLOT
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:ERI79612.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_031_061G1_scaffold_56_27
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30570..30881)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C6F2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI79613.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_031_061G1_scaffold_56_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30905..31303)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34364.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ferric uptake regulator family protein
L2_031_061G1_scaffold_56_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31958..32476
DNA (519bp) protein (173aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DDU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI79617.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_031_061G1_scaffold_56_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32833..33603)
DNA (771bp) protein (257aa)
Iron-chelate-transporting ATPase (EC:3.6.3.34)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=U2BB49_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI69058.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Displaying items 1-30 of 68 in total

View Taxonomy