ggKbase home page

L2_031_061G1_scaffold_65

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_061G1_scaffold_65_1
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3..119)
DNA (117bp) protein (39aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VSL2_9FIRM
DegV family EDD domain-containing protein {ECO:0000313|EMBL:ENY87625.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
EDD, DegV family domain protein
L2_031_061G1_scaffold_65_2
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(297..2156)
DNA (1860bp) protein (620aa)
ABC transporter, ATP-binding protein n=4 Tax=Firmicutes RepID=E4LY06_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFR36294.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ABC-type multidrug transport system, ATPase and permease components
L2_031_061G1_scaffold_65_3
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2156..3880)
DNA (1725bp) protein (575aa)
ABC transporter, ATP-binding protein n=4 Tax=Firmicutes RepID=E4LY07_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFR36369.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ABC-type multidrug transport system, ATPase and permease components
L2_031_061G1_scaffold_65_4
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3912..4340)
DNA (429bp) protein (143aa)
Transcriptional regulator, MarR family n=5 Tax=Firmicutes RepID=E4LY08_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85484.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Transcriptional regulators
L2_031_061G1_scaffold_65_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5152..5292)
DNA (141bp) protein (47aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=E4LY09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ54435.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_061G1_scaffold_65_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5522..7525)
DNA (2004bp) protein (668aa)
Efflux ABC transporter, permease protein n=5 Tax=Firmicutes RepID=E4LY10_9CLOT
FtsX-like permease family protein {ECO:0000313|EMBL:EQJ54436.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ftsX-like permease family protein
L2_031_061G1_scaffold_65_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7875..8174)
DNA (300bp) protein (100aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LY12_9CLOT
YCII-related domain protein {ECO:0000313|EMBL:EQJ54438.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_061G1_scaffold_65_8
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8269..8925)
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae (miscellaneous) RepID=H1B114_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFR36428.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_031_061G1_scaffold_65_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9114..9575)
DNA (462bp) protein (154aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1B115_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ54442.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_061G1_scaffold_65_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9657..10268)
DNA (612bp) protein (204aa)
VanW-like protein n=4 Tax=Firmicutes RepID=E4LY15_9CLOT
VanW like family protein {ECO:0000313|EMBL:EQJ54443.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_061G1_scaffold_65_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10311..10496)
DNA (186bp) protein (62aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1B116_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ54444.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
vancomycin B-type resistance protein VanW
L2_031_061G1_scaffold_65_12
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10572..10913)
DNA (342bp) protein (114aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LY17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY87635.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L2_031_061G1_scaffold_65_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11414..14695)
DNA (3282bp) protein (1094aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B6Y3_9FIRM
SMC s Flexible Hinge domain protein {ECO:0000313|EMBL:EQJ54447.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
SMC domain-containing protein
L2_031_061G1_scaffold_65_14
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14646..15314)
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LY20_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36264.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_031_061G1_scaffold_65_15
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15311..16735)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E4LY21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY87639.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L2_031_061G1_scaffold_65_16
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17048..20296)
DNA (3249bp) protein (1083aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B122_9FIRM
ABC transporter permease {ECO:0000313|EMBL:KGJ51564.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L2_031_061G1_scaffold_65_17
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20298..21002)
DNA (705bp) protein (235aa)
ABC transporter, ATP-binding protein n=8 Tax=Firmicutes RepID=E2SL46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73928.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
hypothetical protein
L2_031_061G1_scaffold_65_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21315..21647
DNA (333bp) protein (111aa)
Transcriptional regulator, PadR family n=4 Tax=Firmicutes RepID=E4LY24_9CLOT
Transcriptional regulator PadR-like family protein {ECO:0000313|EMBL:EQJ54453.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
transcriptional regulator, PadR family
L2_031_061G1_scaffold_65_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21637..22317
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B6X7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ54454.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_061G1_scaffold_65_20
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22314..23090
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=E4LY26_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36194.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
pentapeptide repeat-containing protein
L2_031_061G1_scaffold_65_21
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23309..25513)
DNA (2205bp) protein (735aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VSJ2_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ENY87645.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
L2_031_061G1_scaffold_65_22
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25740..27707
DNA (1968bp) protein (656aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B6X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31343.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
penicillin-binding protein 2
L2_031_061G1_scaffold_65_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27847..28212
DNA (366bp) protein (122aa)
Lactoylglutathione lyase and related lyases (EC:4.4.1.5)
Glyoxalase family protein n=4 Tax=Firmicutes RepID=E4LY30_9CLOT
Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein {ECO:0000313|EMBL:EQJ54460.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_061G1_scaffold_65_24
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28860..30257)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VSI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY87648.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
roundabout, axon guidance receptor 3
L2_031_061G1_scaffold_65_25
unknown

Not on your lists

comp(30569..30727)
DNA (159bp) protein (53aa)

This feature has no annotations

L2_031_061G1_scaffold_65_26
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30971..32830
DNA (1860bp) protein (620aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B6W8_9FIRM
GNAT family acetyltransferase {ECO:0000313|EMBL:KGJ51573.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L2_031_061G1_scaffold_65_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33076..33528)
DNA (453bp) protein (151aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LY36_9CLOT
Nucleoside 2-deoxyribosyltransferase family protein {ECO:0000313|EMBL:EQJ54468.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_061G1_scaffold_65_28
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

34021..35700
DNA (1680bp) protein (560aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae (miscellaneous) RepID=H1B135_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31337.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
plasmid pRiA4b ORF-3 family protein
L2_031_061G1_scaffold_65_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36228..37031)
DNA (804bp) protein (268aa)
Transcriptional regulator, AraC family n=5 Tax=Firmicutes RepID=E4LY41_9CLOT
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EQJ54474.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
AraC family transcription regulator
L2_031_061G1_scaffold_65_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37033..37878)
DNA (846bp) protein (282aa)
DegV family EDD domain-containing protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B137_9FIRM
EDD, DegV family domain protein {ECO:0000313|EMBL:EQJ54475.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
DegV family protein
Displaying items 1-30 of 74 in total

View Taxonomy