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L2_031_061G1_scaffold_123

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_061G1_scaffold_123_1
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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191..1447
DNA (1257bp) protein (419aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1ASF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85703.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
zinc protease
L2_031_061G1_scaffold_123_2
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1428..2711
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1ASF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO28457.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
peptidase, M16 family protein
L2_031_061G1_scaffold_123_3
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2872..3234
DNA (363bp) protein (121aa)
Single-strand binding family protein n=7 Tax=Firmicutes RepID=E4LZB9_9CLOT
Single-strand binding family protein {ECO:0000313|EMBL:EFR35868.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ssb; single-stranded DNA-binding protein ssb
L2_031_061G1_scaffold_123_4
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3324..3926)
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=7 Tax=Firmicutes RepID=E4LZC0_9CLOT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
rpsD; 30S ribosomal protein S4
L2_031_061G1_scaffold_123_5
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4462..6216
DNA (1755bp) protein (585aa)
Septation ring formation regulator EzrA n=4 Tax=Firmicutes RepID=E4LZC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85699.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
ezrA; septation ring formation regulator EzrA
L2_031_061G1_scaffold_123_6
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6218..7348
DNA (1131bp) protein (377aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1ASE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85698.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
iscS; cysteine desulfurase
L2_031_061G1_scaffold_123_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7329..8537
DNA (1209bp) protein (403aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Probable tRNA sulfurtransferase n=6 Tax=Firmicutes RepID=G1VNA0_9FIRM
thiazole biosynthesis/tRNA modification protein ThiI
L2_031_061G1_scaffold_123_8
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8585..8818
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae (miscellaneous) RepID=H1ASE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO28451.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_031_061G1_scaffold_123_9
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8873..9415)
DNA (543bp) protein (181aa)
Nitroreductase family protein n=4 Tax=Firmicutes RepID=E4LZC5_9CLOT
Nitroreductase family protein {ECO:0000313|EMBL:EFR35811.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_031_061G1_scaffold_123_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9528..10346
DNA (819bp) protein (273aa)
rRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.51)
Methyltransferase domain protein n=5 Tax=Firmicutes RepID=E4LZC6_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:EQJ53991.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_061G1_scaffold_123_11
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


10384..11796
DNA (1413bp) protein (471aa)
Signal recognition particle protein n=3 Tax=Erysipelotrichaceae RepID=H1ASE4_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
signal recognition particle subunit FFH/SRP54 (srp54)
L2_031_061G1_scaffold_123_12
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11952..12932
DNA (981bp) protein (327aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1ASE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO28447.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
lactate dehydrogenase-like oxidoreductase
L2_031_061G1_scaffold_123_13
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13395..13622
DNA (228bp) protein (76aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LZC9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85692.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
ECF subfamily RNA polymerase sigma-24 subunit
L2_031_061G1_scaffold_123_14
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13622..13792
DNA (171bp) protein (57aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=G1VNA6_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ENY85559.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
RNA polymerase sigma factor, sigma-70 family
L2_031_061G1_scaffold_123_15
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13925..15088
DNA (1164bp) protein (388aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B978_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO28444.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_031_061G1_scaffold_123_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15306..16175
DNA (870bp) protein (290aa)
Acetyltransferase, GNAT family n=4 Tax=Firmicutes RepID=E4LZD4_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFR35698.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
wecD; TDP-D-fucosamine acetyltransferase
L2_031_061G1_scaffold_123_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16790..19468
DNA (2679bp) protein (893aa)
Bacterial Ig-like domain family protein n=1 Tax=Clostridium difficile P28 RepID=T4NE51_CLODI
Bacterial Ig-like domain family protein {ECO:0000313|EMBL:EQJ53981.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Ig-like domain-containing surface protein
L2_031_061G1_scaffold_123_18
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


19828..20100
DNA (273bp) protein (91aa)
30S ribosomal protein S16 n=8 Tax=Firmicutes RepID=E2SJI3_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
rpsP; 30S ribosomal protein S16
L2_031_061G1_scaffold_123_19
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20107..20355
DNA (249bp) protein (83aa)
Uncharacterized protein n=8 Tax=Firmicutes RepID=E2SJI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFP62320.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
RNA-binding protein (KH domain)
L2_031_061G1_scaffold_123_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20392..20895
DNA (504bp) protein (168aa)
Ribosome maturation factor RimM n=5 Tax=Firmicutes RepID=E4LZD9_9CLOT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
16S rRNA processing protein RimM
L2_031_061G1_scaffold_123_21
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20892..21629
DNA (738bp) protein (246aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=5 Tax=Firmicutes RepID=E4LZE0_9CLOT
L2_031_061G1_scaffold_123_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21982..22569
DNA (588bp) protein (196aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LZE1_9CLOT
Uracil DNA glycosylase superfamily protein {ECO:0000313|EMBL:EQJ53975.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_061G1_scaffold_123_23
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


22839..23186
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=8 Tax=Firmicutes RepID=E2SJH8_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
rplS; 50S ribosomal protein L19
L2_031_061G1_scaffold_123_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23242..23844
DNA (603bp) protein (201aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Signal peptidase I n=6 Tax=Firmicutes RepID=E4LZE3_9CLOT
lepB; signal peptidase I
L2_031_061G1_scaffold_123_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23848..24441
DNA (594bp) protein (198aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Signal peptidase I n=4 Tax=Firmicutes RepID=H1ASC8_9FIRM
signal peptidase
L2_031_061G1_scaffold_123_26
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24431..25297
DNA (867bp) protein (289aa)
Ribosome biogenesis GTPase A n=2 Tax=Firmicutes RepID=H1ASC7_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
GTPase
L2_031_061G1_scaffold_123_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25245..25904
DNA (660bp) protein (220aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
RNase HII (EC:3.1.26.4)
Ribonuclease HII n=5 Tax=Firmicutes RepID=E4LZE6_9CLOT
L2_031_061G1_scaffold_123_28
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26034..26411
DNA (378bp) protein (126aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LZE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO28431.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L2_031_061G1_scaffold_123_29
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26374..26850
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1ASC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX76406.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
hypothetical protein
L2_031_061G1_scaffold_123_30
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26873..27817
DNA (945bp) protein (315aa)
SPFH/Band 7/PHB domain protein n=6 Tax=Firmicutes RepID=E4LZE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85575.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
Displaying items 1-30 of 58 in total

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