ggKbase home page

L2_031_061G1_scaffold_144

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_061G1_scaffold_144_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(120..1052)
DNA (933bp) protein (311aa)
Cell wall binding repeat protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JN09_CLOBU
Choline binding protein A {ECO:0000313|EMBL:KJZ84772.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative cell wall binding protein
L2_031_061G1_scaffold_144_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1275..2741)
DNA (1467bp) protein (489aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4ILJ5_CLOBU
Capsular biosynthesis protein {ECO:0000313|EMBL:KHD15350.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
polysaccharide biosynthesis protein
L2_031_061G1_scaffold_144_3
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3248..3883
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FSM1_CLOPA
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AJH01755.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L2_031_061G1_scaffold_144_4
unknown

Not on your lists

3891..4595
DNA (705bp) protein (235aa)

This feature has no annotations

L2_031_061G1_scaffold_144_5
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4690..5385)
DNA (696bp) protein (232aa)
Phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M0M8_9CLOT
phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes
Phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes {ECO:0000313|EMBL:AGF59130.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_031_061G1_scaffold_144_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5490..7340)
DNA (1851bp) protein (617aa)
Choline/ethanolamine kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDL5_CLOBU
Choline kinase {ECO:0000313|EMBL:KHD15346.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
choline/ethanolamine kinase
L2_031_061G1_scaffold_144_7
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7622..10648)
DNA (3027bp) protein (1009aa)
Cell wall binding repeat-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7B0_9CLOT
Cell wall binding repeat-containing protein {ECO:0000313|EMBL:EHJ02089.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
cell wall binding repeat-containing protein
L2_031_061G1_scaffold_144_8
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10951..11955
DNA (1005bp) protein (335aa)
Membrane protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G136_9CLOT
Membrane protein {ECO:0000313|EMBL:CDB15259.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
L2_031_061G1_scaffold_144_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12079..12552)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZL0_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45111.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_061G1_scaffold_144_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12806..13639)
DNA (834bp) protein (278aa)
Transposase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U674_9CLOT
Transposase {ECO:0000313|EMBL:EKQ50504.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_031_061G1_scaffold_144_11
unknown

Not on your lists

comp(13778..13921)
DNA (144bp) protein (48aa)

This feature has no annotations

L2_031_061G1_scaffold_144_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14009..16018)
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A2R7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96560.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
pspC4; surface protein PspC
L2_031_061G1_scaffold_144_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16531..18849)
DNA (2319bp) protein (773aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Cell wall hydrolase/autolysin n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7B2_9CLOT
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:EHJ02091.1}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
L2_031_061G1_scaffold_144_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19023..19292)
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TQD5_CLOBB
putative anaerobic ribonucleoside-triphosphate reductase
Uncharacterized protein {ECO:0000313|EMBL:ACD23348.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_031_061G1_scaffold_144_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19668..20171)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HD35_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97213.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L2_031_061G1_scaffold_144_16
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20259..20891)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1ML37_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF56978.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_031_061G1_scaffold_144_17
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21075..22802
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MX74_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45143.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_061G1_scaffold_144_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22861..24456)
DNA (1596bp) protein (532aa)
Peptide chain release factor 3 n=2 Tax=Clostridium botulinum E RepID=B2UYS7_CLOBA
prfC; peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_031_061G1_scaffold_144_19
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25174..28599)
DNA (3426bp) protein (1142aa)
Cell wall/surface repeat protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M2J9_CLOB8
Cell wall/surface repeat-containing protein {ECO:0000313|EMBL:AJH01784.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
cell wall/surface repeat-containing protein
L2_031_061G1_scaffold_144_20
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28838..30034)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U7G1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ51199.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_031_061G1_scaffold_144_21
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30052..31452)
DNA (1401bp) protein (467aa)
Putative membrane protein involved in D-alanine export n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TIP0_9CLOT
Putative membrane protein involved in D-alanine export {ECO:0000313|EMBL:EKQ51200.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
alginate O-acetylation protein
L2_031_061G1_scaffold_144_22
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31483..31959)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ51201.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
lipoprotein
L2_031_061G1_scaffold_144_23
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31965..32810)
DNA (846bp) protein (282aa)
Lysophospholipase L1-like esterase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TW86_9CLOT
Lysophospholipase L1-like esterase {ECO:0000313|EMBL:EKQ51202.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
platelet activating factor acetylhydrolase-like protein
L2_031_061G1_scaffold_144_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33462..34514)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U7G3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ51204.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
3D domain-containing protein
L2_031_061G1_scaffold_144_25
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34681..35097)
DNA (417bp) protein (139aa)
3D domain-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M6C3_9CLOT
3D domain-containing protein {ECO:0000313|EMBL:EHJ00839.1}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_031_061G1_scaffold_144_26
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35320..37578)
DNA (2259bp) protein (753aa)
Putative cell wall binding protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TTB0_9CLOT
Putative cell wall binding protein {ECO:0000313|EMBL:EKQ50511.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
putative cell wall binding protein
L2_031_061G1_scaffold_144_27
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37777..39222)
DNA (1446bp) protein (482aa)
Putative cell wall binding repeat-containing protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MX83_CLOSA
putative cell wall binding repeat-containing protein
Putative cell wall binding repeat-containing protein {ECO:0000313|EMBL:AGX45153.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_061G1_scaffold_144_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39573..41378)
DNA (1806bp) protein (602aa)
Putative cell wall binding repeat protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UXB3_CLOBO
Putative cell wall binding repeat protein {ECO:0000313|EMBL:EES48961.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
surface protein PspC
L2_031_061G1_scaffold_144_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41799..43487)
DNA (1689bp) protein (563aa)
Cell wall binding repeat protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UWU4_CLOBO
Choline binding protein A {ECO:0000313|EMBL:CDH92133.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
hypothetical protein
L2_031_061G1_scaffold_144_30
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43824..45542)
DNA (1719bp) protein (573aa)
Putative cell wall binding protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6THA1_9CLOT
Putative cell wall binding protein {ECO:0000313|EMBL:EKQ50515.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
Displaying items 1-30 of 32 in total

View Taxonomy