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L2_031_061G1_scaffold_198

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_061G1_scaffold_198_1
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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163..864
DNA (702bp) protein (234aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VSL2_9FIRM
DegV family EDD domain-containing protein {ECO:0000313|EMBL:ENY87625.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L2_031_061G1_scaffold_198_2
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1350..1787
DNA (438bp) protein (146aa)
50S ribosomal protein L13 n=6 Tax=Firmicutes RepID=G1VSL3_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
LSU ribosomal protein L13P
L2_031_061G1_scaffold_198_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1800..2204
DNA (405bp) protein (135aa)
30S ribosomal protein S9 n=7 Tax=Firmicutes RepID=E4LY04_9CLOT
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
SSU ribosomal protein S9P
L2_031_061G1_scaffold_198_4
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2538..3620
DNA (1083bp) protein (361aa)
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=4 Tax=Firmicutes RepID=E4LY03_9CLOT
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:EFR36401.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
L2_031_061G1_scaffold_198_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3635..4528
DNA (894bp) protein (298aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1B104_9FIRM
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EQJ54425.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
AraC family transcriptional regulator
L2_031_061G1_scaffold_198_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4629..5168
DNA (540bp) protein (180aa)
Methylated-DNA-[]-cysteine S-methyltransferase family protein {ECO:0000313|EMBL:EQJ54423.1}; EC=2.1.1.63 {ECO:0000313|EMBL:EQJ54423.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein n=5 Tax=Firmicutes RepID=E4LXZ9_9CLOT
L2_031_061G1_scaffold_198_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5597..6817)
DNA (1221bp) protein (407aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|RuleBase:RU003777, ECO:0000256|SAAS:SAAS00087750}; EC=2.4.2.29 {ECO:0000256|RuleBase:RU003777, ECO:0000256|SAAS:SAAS00087822};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
tgt; tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=7 Tax=Firmicutes RepID=E4LXZ8_9CLOT
L2_031_061G1_scaffold_198_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6804..7448)
DNA (645bp) protein (215aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1B101_9FIRM
Conserved hypothetical integral membrane family protein {ECO:0000313|EMBL:EQJ54420.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_061G1_scaffold_198_9
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7821..8195
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B100_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23356.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L2_031_061G1_scaffold_198_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8437..8757
DNA (321bp) protein (107aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LXZ5_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EQJ54418.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_061G1_scaffold_198_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8843..10456)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BDU3_9FIRM
Collagen triple helix repeat family protein {ECO:0000313|EMBL:EQJ54417.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
bclA2; exosporium glycoprotein
L2_031_061G1_scaffold_198_12
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10648..12915)
DNA (2268bp) protein (756aa)
Putative excinuclease ABC, A subunit n=1 Tax=Clostridium sp. HGF2 RepID=E4LXZ3_9CLOT
Putative excinuclease ABC, A subunit {ECO:0000313|EMBL:EFR36154.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ABC transporter
L2_031_061G1_scaffold_198_13
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13353..14453
DNA (1101bp) protein (367aa)
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B0Z6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85499.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_031_061G1_scaffold_198_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14730..15260
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BDU6_9FIRM
Dihydrofolate reductase {ECO:0000313|EMBL:EQJ54414.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Dihydrofolate reductase
L2_031_061G1_scaffold_198_15
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15307..15903)
DNA (597bp) protein (199aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VSR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY87611.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
putative prophage repressor
L2_031_061G1_scaffold_198_16
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16068..17321
DNA (1254bp) protein (418aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1B0Z3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85502.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_031_061G1_scaffold_198_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17311..17658
DNA (348bp) protein (116aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B0Z2_9FIRM
YolD-like family protein {ECO:0000313|EMBL:EQJ54411.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_031_061G1_scaffold_198_18
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18352..19821
DNA (1470bp) protein (490aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B0Z1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85504.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
transcriptional regulator
L2_031_061G1_scaffold_198_19
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20037..21983)
DNA (1947bp) protein (649aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B0Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85505.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L2_031_061G1_scaffold_198_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22123..23190)
DNA (1068bp) protein (356aa)
Transcriptional regulator, AraC family n=5 Tax=Firmicutes RepID=E4LXY4_9CLOT
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EQJ54408.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
AraC family transcriptional regulator
L2_031_061G1_scaffold_198_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23388..23801
DNA (414bp) protein (138aa)
Peptide deformylase n=5 Tax=Firmicutes RepID=E4LXY3_9CLOT
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
N-formylmethionyl-tRNA deformylase
L2_031_061G1_scaffold_198_22
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24166..25164
DNA (999bp) protein (333aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Erysipelotrichaceae RepID=H1B0Y7_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CDC85508.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L2_031_061G1_scaffold_198_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25165..25296
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NGK1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54404.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_031_061G1_scaffold_198_24
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25567..26058
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B0Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85509.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L2_031_061G1_scaffold_198_25
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26055..26567
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B0Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85510.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L2_031_061G1_scaffold_198_26
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26551..26985
DNA (435bp) protein (145aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LXX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36324.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_031_061G1_scaffold_198_27
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27370..28059
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=7 Tax=Firmicutes RepID=E4LXX7_9CLOT
Two-component system response regulator VanR {ECO:0000313|EMBL:ENY87600.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L2_031_061G1_scaffold_198_28
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28056..29189
DNA (1134bp) protein (378aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Firmicutes RepID=E4LXX6_9CLOT
signal transduction histidine kinase
L2_031_061G1_scaffold_198_29
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29217..29378
DNA (162bp) protein (54aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B0Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23376.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_031_061G1_scaffold_198_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29675..30595
DNA (921bp) protein (307aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=5 Tax=Firmicutes RepID=E4LXX4_9CLOT
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:EQJ54395.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Displaying items 1-30 of 39 in total

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