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L2_031_061G1_scaffold_231

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_061G1_scaffold_231_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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924..1313
DNA (390bp) protein (130aa)
Orf1 n=37 Tax=Escherichia coli RepID=O52122_ECOLX
ler; transcriptional regulator Ler
Transcription regulator Ler {ECO:0000313|EMBL:BAI37557.1}; TaxID=585396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H- (strain 11128 / EHEC).;"
L2_031_061G1_scaffold_231_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1328..1546
DNA (219bp) protein (73aa)
L0053 n=251 Tax=Escherichia coli RepID=O52123_ECOLX
T3SS component
Uncharacterized protein {ECO:0000313|EMBL:EZD27552.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
L2_031_061G1_scaffold_231_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1550..1873
DNA (324bp) protein (108aa)
L0052 n=72 Tax=Escherichia coli RepID=O52124_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD58908.1}; TaxID=701177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O55:H7 (strain CB9615 / EPEC).;"
L2_031_061G1_scaffold_231_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1870..2469
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=T9ILN8_ECOLX
component of T3SS
T3SS component {ECO:0000313|EMBL:BAI37554.1}; TaxID=585396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H- (strain 11128 / EHEC).;"
L2_031_061G1_scaffold_231_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2456..3109
DNA (654bp) protein (218aa)
Type III secretion system, LEE associated n=26 Tax=Escherichia coli RepID=B8ZYB6_ECOLX
T3SS component
Uncharacterized protein {ECO:0000313|EMBL:EZD27555.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
L2_031_061G1_scaffold_231_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3114..3767
DNA (654bp) protein (218aa)
EscR protein n=254 Tax=Escherichia coli RepID=O85642_ECOLX
escR; type III secretion system EscR protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFR15403.1}; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
L2_031_061G1_scaffold_231_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3767..4036
DNA (270bp) protein (90aa)
EscS n=120 Tax=Escherichia coli RepID=O52128_ECOLX
escS; EscS
Type III secretion inner membrane protein EscS {ECO:0000313|EMBL:AHY73187.1}; TaxID=1248823 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H28 str. RM12581.;"
L2_031_061G1_scaffold_231_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4048..4812
DNA (765bp) protein (255aa)
EscT n=233 Tax=Escherichia coli RepID=O85641_ECOLX
escT; putative T3SS structure protein EscT
EscT {ECO:0000313|EMBL:AAG58845.1}; Type III secretion system protein EscT {ECO:0000313|EMBL:ACG59643.1}; TaxID=83334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:H7.;"
L2_031_061G1_scaffold_231_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4805..5842
DNA (1038bp) protein (346aa)
EscU n=20 Tax=Escherichia coli RepID=O52130_ECOLX
escU; T3SS structure protein EscU
T3SS structure protein EscU {ECO:0000313|EMBL:BAI37549.1}; TaxID=585396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H- (strain 11128 / EHEC).;"
L2_031_061G1_scaffold_231_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5839..6297)
DNA (459bp) protein (153aa)
Uncharacterized protein n=21 Tax=Escherichia coli RepID=C8UFM6_ECO1A
hypothetical protein
Lytic transglycosylase {ECO:0000313|EMBL:EZD27560.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
L2_031_061G1_scaffold_231_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6493..6864
DNA (372bp) protein (124aa)
Type III secretion system, negative regulator,LEE associated n=19 Tax=Escherichia coli RepID=Q5WMA9_ECOLX
grlR; negative regulator GrlR
Nucleoside transporter {ECO:0000313|EMBL:ETD63324.1}; TaxID=1405293 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ATCC BAA-2209.;"
L2_031_061G1_scaffold_231_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6920..7333
DNA (414bp) protein (138aa)
Orf11 n=18 Tax=Escherichia coli RepID=O52133_ECOLX
grlA; positive regulator GrlA
Positive regulator GrlA {ECO:0000313|EMBL:EJE61674.1}; TaxID=1165944 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H8 str. CVM9634.;"
L2_031_061G1_scaffold_231_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7717..8172)
DNA (456bp) protein (152aa)
CesD n=210 Tax=Escherichia coli RepID=O52134_ECOLX
cesD; type III secretion low calcium response chaperone LcrH/SycD
CesD {ECO:0000313|EMBL:AAG58840.1}; Type III secretion system protein CesD {ECO:0000313|EMBL:ACG59638.1}; TaxID=83334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:H7.;"
L2_031_061G1_scaffold_231_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8186..9724)
DNA (1539bp) protein (513aa)
EscC protein n=23 Tax=Escherichia coli RepID=Q5WME2_ECOLX
escC; T3SS structure protein EscC
Uncharacterized protein {ECO:0000313|EMBL:EHU04425.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
L2_031_061G1_scaffold_231_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9724..10179)
DNA (456bp) protein (152aa)
SepD protein n=29 Tax=Escherichia coli RepID=Q5WME1_ECOLX
sepD; secretion switching protein SepD
Secretion switching protein SepD {ECO:0000313|EMBL:BAI37543.1}; TaxID=585396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H- (strain 11128 / EHEC).;"
L2_031_061G1_scaffold_231_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10185..10757)
DNA (573bp) protein (191aa)
EscJ n=263 Tax=Escherichia coli RepID=O52136_ECOLX
escJ; T3SS structure protein EscJ
Type III secretory protein EscJ {ECO:0000313|EMBL:EZD27566.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
L2_031_061G1_scaffold_231_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10760..11188)
DNA (429bp) protein (143aa)
Chaperone Rorf8 n=4 Tax=Escherichia coli RepID=I4NQ59_ECOLX
rorf8; chaperone Rorf8
Chaperone Rorf8 {ECO:0000313|EMBL:BAI37541.1}; TaxID=585396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H- (strain 11128 / EHEC).;"
L2_031_061G1_scaffold_231_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11220..11516)
DNA (297bp) protein (99aa)
T3SS secreted effector EspZ n=3 Tax=Escherichia coli RepID=I4NQ58_ECOLX
espZ; T3SS secreted effector EspZ
SepZ {ECO:0000313|EMBL:EZD27568.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
L2_031_061G1_scaffold_231_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11701..12054
DNA (354bp) protein (118aa)
L0036 n=233 Tax=Escherichia coli RepID=O52138_ECOLX
mpc; regulator Mpc
T3SS regulator Mpc {ECO:0000313|EMBL:EZD27569.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
L2_031_061G1_scaffold_231_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12051..14078
DNA (2028bp) protein (676aa)
Type III secretion system, LEE associated n=21 Tax=Escherichia coli RepID=B8ZYA2_ECOLX
Secretion system apparatus protein SsaV {ECO:0000313|EMBL:ETD63333.1}; TaxID=1405293 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ATCC BAA-2209.;"
escV; putative translocator EscV
L2_031_061G1_scaffold_231_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14062..15402
DNA (1341bp) protein (447aa)
Type III secretion system, ATPase, LEE associated n=17 Tax=Escherichia coli RepID=B8ZYA0_ECOLX
escN; translocator EscN
Type III secretion protein ATPase {ECO:0000313|EMBL:EZD27571.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
L2_031_061G1_scaffold_231_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15405..15782
DNA (378bp) protein (126aa)
Type III secretion system, LEE associated n=20 Tax=Escherichia coli RepID=B8ZY99_ECOLX
putative T3SS component protein
Predicted T3SS component protein {ECO:0000313|EMBL:BAI37536.1}; TaxID=585396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H- (strain 11128 / EHEC).;"
L2_031_061G1_scaffold_231_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15775..16191
DNA (417bp) protein (139aa)
Type III secretion system, translocator secretion, LEE associated n=7 Tax=Escherichia coli RepID=B8ZY98_ECOLX
putative T3SS component protein
Predicted T3SS component protein {ECO:0000313|EMBL:BAI37535.1}; TaxID=585396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H- (strain 11128 / EHEC).;"
L2_031_061G1_scaffold_231_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16154..17071
DNA (918bp) protein (306aa)
Type III secretion system, LEE associated n=18 Tax=Escherichia coli RepID=B8ZY97_ECOLX
sepQ; T3SS structure protein SepQ
SepQ protein {ECO:0000313|EMBL:EIH76214.1}; TaxID=869681 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0522.;"
L2_031_061G1_scaffold_231_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17099..17611
DNA (513bp) protein (171aa)
Type III secretion system, translocated effector protein, LEE associated n=19 Tax=Escherichia coli RepID=B8ZY96_ECOLX
Type III secretion system, translocated effector protein, LEE associated {ECO:0000313|EMBL:CAX18574.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
espH; T3SS secreted effector EspH
L2_031_061G1_scaffold_231_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17790..18152)
DNA (363bp) protein (121aa)
ROrf10 n=3 Tax=Escherichia coli RepID=E7UGB3_ECOLX
cesF; chaperone CesF
Molecular chaperone CesF {ECO:0000313|EMBL:EZD27575.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
L2_031_061G1_scaffold_231_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18417..19028
DNA (612bp) protein (204aa)
Type III secretion system, translocated effector protein, LEE associated n=20 Tax=Escherichia coli RepID=B8ZY94_ECOLX
map; T3SS secreted effector Map
Uncharacterized protein {ECO:0000313|EMBL:EZD27576.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
L2_031_061G1_scaffold_231_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19352..21007
DNA (1656bp) protein (552aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=T9IKU3_ECOLX
tir; putative translocated intimin receptor Tir
Translocated intimin receptor Tir {ECO:0000313|EMBL:EZD27577.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
L2_031_061G1_scaffold_231_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21142..21612
DNA (471bp) protein (157aa)
Tir chaperone n=28 Tax=Escherichia coli RepID=CEST_ECO11
cesT; putative chaperone CesT
Tir chaperone {ECO:0000313|EMBL:ETD59261.1}; TaxID=1405293 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ATCC BAA-2209.;"
L2_031_061G1_scaffold_231_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21670..24477
DNA (2808bp) protein (936aa)
Intimin n=17 Tax=Bacteria RepID=Q8VL95_ECOLX
eae; theta intimin
Intimin {ECO:0000313|EMBL:EZD27579.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
Displaying items 1-30 of 39 in total

View Taxonomy