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L2_031_061G1_scaffold_281

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_061G1_scaffold_281_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

85..294
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WA93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEA81309.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
putative hydrolase Tn1549-like, CTn4-Orf9
L2_031_061G1_scaffold_281_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

291..1250
DNA (960bp) protein (320aa)
DNA modification methylase (EC:2.1.1.72)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA modification methylase n=15 Tax=Clostridiales RepID=D4L9D7_9FIRM
L2_031_061G1_scaffold_281_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1286..3355
DNA (2070bp) protein (690aa)
Uncharacterized protein n=14 Tax=Firmicutes RepID=A8SX22_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGN49715.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_031_061G1_scaffold_281_4
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3390..3668
DNA (279bp) protein (93aa)
Uncharacterized protein n=17 Tax=Firmicutes RepID=A8SX20_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE13573.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_031_061G1_scaffold_281_5
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3661..4362
DNA (702bp) protein (234aa)
Uncharacterized protein n=15 Tax=Firmicutes RepID=A8SX19_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP25454.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
L2_031_061G1_scaffold_281_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4359..4547
DNA (189bp) protein (63aa)
Uncharacterized protein n=14 Tax=Firmicutes RepID=A8SX18_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHF06209.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L2_031_061G1_scaffold_281_7
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4563..6653
DNA (2091bp) protein (697aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
Topoisomerase IA (EC:5.99.1.2)
DNA topoisomerase III n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5FB68_9FIRM
L2_031_061G1_scaffold_281_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6866..10429
DNA (3564bp) protein (1188aa)
Uncharacterized protein n=14 Tax=Firmicutes RepID=B0G6X6_9FIRM
Domain of unknown function (DUF955)./Antirestriction protein (ArdA).
Uncharacterized protein {ECO:0000313|EMBL:EEA81302.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_031_061G1_scaffold_281_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10433..11386
DNA (954bp) protein (318aa)
Uncharacterized protein n=15 Tax=Firmicutes RepID=B0G6X5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGN49721.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_031_061G1_scaffold_281_10
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11389..11595
DNA (207bp) protein (69aa)
Uncharacterized protein n=31 Tax=Firmicutes RepID=A8RSQ7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDR97069.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
L2_031_061G1_scaffold_281_11
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11592..11957
DNA (366bp) protein (122aa)
Uncharacterized protein n=12 Tax=Firmicutes RepID=B0G6X3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE13580.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L2_031_061G1_scaffold_281_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12135..12386)
DNA (252bp) protein (84aa)
Uncharacterized protein n=17 Tax=Firmicutes RepID=A8SX10_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD20457.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_031_061G1_scaffold_281_13
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12450..13796)
DNA (1347bp) protein (449aa)
Relaxase/Mobilisation nuclease domain n=17 Tax=Bacteria RepID=D4L9E8_9FIRM
Relaxase/Mobilisation nuclease domain.
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EDS10543.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_031_061G1_scaffold_281_14
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13757..14086)
DNA (330bp) protein (110aa)
Bacterial mobilisation protein (MobC) n=19 Tax=Bacteria RepID=D4L9E9_9FIRM
Bacterial mobilisation protein (MobC).
Bacterial mobilization protein MobC {ECO:0000313|EMBL:EDR97073.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
L2_031_061G1_scaffold_281_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14354..14602)
DNA (249bp) protein (83aa)
Helix-turn-helix n=22 Tax=Bacteria RepID=D4L9F0_9FIRM
Helix-turn-helix.
Uncharacterized protein {ECO:0000313|EMBL:ETD20460.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_031_061G1_scaffold_281_16
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15092..15271
DNA (180bp) protein (60aa)
Uncharacterized protein n=17 Tax=Bacteria RepID=B0G6W8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHO49676.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
L2_031_061G1_scaffold_281_17
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15295..16284
DNA (990bp) protein (330aa)
radical SAM enzyme, Cfr family (EC:2.1.1.-)
23S rRNA m2A2503 methyltransferase {ECO:0000313|EMBL:EDP25442.1}; EC=2.1.1.- {ECO:0000313|EMBL:EDP25442.1};; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
Radical SAM enzyme, Cfr family n=23 Tax=Firmicutes RepID=D4L9F2_9FIRM
L2_031_061G1_scaffold_281_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16822..17262
DNA (441bp) protein (147aa)
Sigma-70 family RNA polymerase sigma factor n=13 Tax=Clostridiales RepID=N9W9M7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETD20463.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
sigma-70 family RNA polymerase sigma factor
L2_031_061G1_scaffold_281_19
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17243..17503
DNA (261bp) protein (87aa)
Uncharacterized protein n=21 Tax=root RepID=K1RYY9_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE13587.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_031_061G1_scaffold_281_20
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17981..18148
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium difficile E9 RepID=U4APP7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EDR97079.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
hypothetical protein
L2_031_061G1_scaffold_281_21
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18249..19925
DNA (1677bp) protein (559aa)
Site-specific recombinases, DNA invertase Pin homologs n=25 Tax=Firmicutes RepID=D4L9F5_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDR46872.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
L2_031_061G1_scaffold_281_22
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19974..20180)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NID7_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS05601.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_031_061G1_scaffold_281_23
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20235..20498)
DNA (264bp) protein (88aa)
Uncharacterized protein n=35 Tax=root RepID=A5ZNP1_9FIRM
hypothetical protein
Stage II sporulation protein R {ECO:0000313|EMBL:ESV55826.1}; TaxID=1154860 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus agalactiae LMG 14747.;"
L2_031_061G1_scaffold_281_24
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20498..20728)
DNA (231bp) protein (77aa)
Uncharacterized protein conserved in bacteria n=31 Tax=root RepID=D4L0X4_9FIRM
hypothetical protein
Seryl-tRNA synthetase {ECO:0000313|EMBL:ESV55827.1}; TaxID=1154860 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus agalactiae LMG 14747.;"
L2_031_061G1_scaffold_281_25
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20774..21628)
DNA (855bp) protein (285aa)
ParB-like partition proteins n=26 Tax=root RepID=D4L0X3_9FIRM
hypothetical protein
ParB-like partition protein {ECO:0000313|EMBL:EOS38964.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L2_031_061G1_scaffold_281_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21637..22602)
DNA (966bp) protein (322aa)
Plasmid recombination enzyme n=29 Tax=root RepID=D4L0X2_9FIRM
hypothetical protein
Plasmid recombination protein {ECO:0000313|EMBL:ENZ09676.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L2_031_061G1_scaffold_281_27
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23127..24152)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=23 Tax=root RepID=A7VZ31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOS38962.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_031_061G1_scaffold_281_28
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24611..24781)
DNA (171bp) protein (57aa)
RNA polymerase ECF-type sigma n=1 Tax=gut metagenome RepID=J9CDY6_9ZZZZ
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EOS38961.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
RNA polymerase ECF-type sigma factor
L2_031_061G1_scaffold_281_29
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24865..25290)
DNA (426bp) protein (142aa)
Sigma-70, region 4 n=35 Tax=root RepID=V6W360_STRPY
hypothetical protein
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDM61982.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L2_031_061G1_scaffold_281_30
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25385..25897)
DNA (513bp) protein (171aa)
Sigma-70 region 4 domain protein n=36 Tax=Bacteria RepID=D9SLI1_CLOC7
DNA-directed RNA polymerase specialized sigma subunit
Uncharacterized protein {ECO:0000313|EMBL:ETD26062.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Displaying 30 items

View Taxonomy