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L2_031_061G1_scaffold_283

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_061G1_scaffold_283_1
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..250)
DNA (249bp) protein (83aa)
Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P878_9FIRM
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EDS12124.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_031_061G1_scaffold_283_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(306..470)
DNA (165bp) protein (55aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPZ0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93250.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L2_031_061G1_scaffold_283_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(621..2588)
DNA (1968bp) protein (656aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPY9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93249.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_031_061G1_scaffold_283_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2605..4818)
DNA (2214bp) protein (738aa)
ABC-type transport system n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPY8_CLOSY
ABC-type transport system {ECO:0000313|EMBL:EGA93248.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type transport system, involved in lipoprotein release, permease component
L2_031_061G1_scaffold_283_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4805..5572)
DNA (768bp) protein (256aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCK5_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBL02568.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_031_061G1_scaffold_283_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5674..6687)
DNA (1014bp) protein (338aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZJ2_RUMGN
Signal transduction histidine kinase
L2_031_061G1_scaffold_283_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6684..7352)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B3 RepID=N9ZHU7_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EDN78854.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_031_061G1_scaffold_283_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7429..7602)
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7AZJ4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78855.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_031_061G1_scaffold_283_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7631..8050)
DNA (420bp) protein (140aa)
Uncharacterized protein n=4 Tax=root RepID=A5Z6V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN78856.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_031_061G1_scaffold_283_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8063..8650)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZJ6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78857.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Protein of unknown function (DUF2812).
L2_031_061G1_scaffold_283_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8647..8970)
DNA (324bp) protein (108aa)
Transcriptional regulator, PadR family n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZJ7_RUMGN
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDN78858.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transcriptional regulator, PadR family
L2_031_061G1_scaffold_283_12
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9182..9301)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B3 RepID=N9ZHU3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL24172.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_031_061G1_scaffold_283_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9311..9961)
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPY0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93240.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_031_061G1_scaffold_283_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9954..10814)
DNA (861bp) protein (287aa)
ABC transporter n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPX9_CLOSY
ABC transporter {ECO:0000313|EMBL:EGA93239.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type multidrug transport system, ATPase component
L2_031_061G1_scaffold_283_15
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10807..11190)
DNA (384bp) protein (128aa)
Transcriptional regulator, GntR family n=8 Tax=root RepID=D4LTR7_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBL24175.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_031_061G1_scaffold_283_16
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11403..12173)
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N1ZML2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS58792.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Hypothetical protein
L2_031_061G1_scaffold_283_17
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12298..13143)
DNA (846bp) protein (282aa)
Reverse transcriptase (RNA-dependent DNA polymerase) n=4 Tax=Lachnospiraceae RepID=C9L8A6_BLAHA
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:EEX21598.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Retron-type reverse transcriptase
L2_031_061G1_scaffold_283_18
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13362..13682
DNA (321bp) protein (107aa)
Transposase n=2 Tax=Subdoligranulum RepID=D1PJY8_9FIRM
Transposase {ECO:0000313|EMBL:EFB77086.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
transposase IS3/IS911 family protein
L2_031_061G1_scaffold_283_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13994..14410)
DNA (417bp) protein (139aa)
Putative uncharacterized protein (Fragment) n=5 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64719.1}; Flags: Fragment;; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_031_061G1_scaffold_283_20
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14464..15039)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AHR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80226.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Retron-type reverse transcriptase
L2_031_061G1_scaffold_283_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15483..17867)
DNA (2385bp) protein (795aa)
Efflux ABC transporter, permease protein n=2 Tax=root RepID=A7AZJ8_RUMGN
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDN78859.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ABC-type transport system, involved in lipoprotein release, permease component
L2_031_061G1_scaffold_283_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17945..20329)
DNA (2385bp) protein (795aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPX5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93235.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
permease
L2_031_061G1_scaffold_283_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20344..21009)
DNA (666bp) protein (222aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=A7AZK0_RUMGN
ABC transporter {ECO:0000313|EMBL:EGA93234.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type antimicrobial peptide transport system, ATPase component
L2_031_061G1_scaffold_283_24
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21129..23522)
DNA (2394bp) protein (798aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MYG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS75828.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L2_031_061G1_scaffold_283_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23624..23884)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPX2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93232.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L2_031_061G1_scaffold_283_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24013..25044)
DNA (1032bp) protein (344aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZK4_RUMGN
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_031_061G1_scaffold_283_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25041..25730)
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPX0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93230.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_031_061G1_scaffold_283_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26001..26108)
DNA (108bp) protein (36aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPZ1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93251.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Displaying 28 items

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