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L2_031_061G1_scaffold_292

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_061G1_scaffold_292_1
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(117..1922)
DNA (1806bp) protein (602aa)
yesM1; sensor histidine kinase YesM (EC:2.7.13.3)
Putative signal transduction protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TCB2_9CLOT
Putative signal transduction protein {ECO:0000313|EMBL:EKQ57578.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_031_061G1_scaffold_292_2
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1952..3505)
DNA (1554bp) protein (518aa)
Two component transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SM88_CLOC7
two component transcriptional regulator, AraC family
Two component transcriptional regulator, AraC family {ECO:0000313|EMBL:ADL53744.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L2_031_061G1_scaffold_292_3
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3789..6812
DNA (3024bp) protein (1008aa)
cbgA; beta-galactosidase CbgA (EC:3.2.1.23)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Beta-galactosidase CbgA n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M9H1_9CLOT
L2_031_061G1_scaffold_292_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6997..7758
DNA (762bp) protein (254aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum RepID=B1IEM9_CLOBK
Uncharacterized protein {ECO:0000313|EMBL:KIN81020.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
L2_031_061G1_scaffold_292_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7881..8747)
DNA (867bp) protein (289aa)
fba; fructose-1,6-bisphosphate aldolase, class II (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=3 Tax=Clostridium butyricum RepID=C4IG33_CLOBU
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:ENZ36526.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_031_061G1_scaffold_292_6
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9083..9646
DNA (564bp) protein (188aa)
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6C3_9CLOT
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:EKQ56727.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
acetyltransferase, ribosomal protein N-acetylase
L2_031_061G1_scaffold_292_7
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9674..10438
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TBK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ57278.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
anaphase-promoting complex, cyclosome, subunit 3
L2_031_061G1_scaffold_292_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10965..12896
DNA (1932bp) protein (644aa)
ABC transporter, ATP-binding protein n=3 Tax=Clostridium butyricum RepID=B1QSA4_CLOBU
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEP53972.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ABC transporter
L2_031_061G1_scaffold_292_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12966..13214
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V1L2_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY78864.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L2_031_061G1_scaffold_292_10
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13227..16475
DNA (3249bp) protein (1083aa)
SNF2 helicase associated domain protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M5E8_9CLOT
SNF2 helicase associated domain protein {ECO:0000313|EMBL:EHI99903.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
non-specific serine/threonine protein kinase
L2_031_061G1_scaffold_292_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16788..17501
DNA (714bp) protein (238aa)
Protein YhiD n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS10_CLOSA
yhiD; protein YhiD
Protein YhiD {ECO:0000313|EMBL:AGX43318.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_061G1_scaffold_292_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17656..18627
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRU9_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43248.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_061G1_scaffold_292_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18602..19429
DNA (828bp) protein (276aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M1B0_9CLOT
L2_031_061G1_scaffold_292_14
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19672..20508
DNA (837bp) protein (279aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
panC; pantothenate synthetase PanC (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M1B1_9CLOT
L2_031_061G1_scaffold_292_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20700..21074
DNA (375bp) protein (125aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Aspartate 1-decarboxylase n=4 Tax=Clostridium butyricum RepID=B1QXI8_CLOBU
aspartate alpha-decarboxylase
L2_031_061G1_scaffold_292_16
unknown

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comp(21105..21206)
DNA (102bp) protein (34aa)

This feature has no annotations

L2_031_061G1_scaffold_292_17
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21385..21987
DNA (603bp) protein (201aa)
NUDIX hydrolase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5ML94_CLOSA
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AGX41569.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_061G1_scaffold_292_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22124..24202
DNA (2079bp) protein (693aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Sensory box histidine kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JF41_CLOBU
two-component sensor kinase
Displaying 18 items

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