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L2_031_061G1_scaffold_319

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_061G1_scaffold_319_1
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

258..872
DNA (615bp) protein (205aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9X250_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25386.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
integrase family protein
L2_031_061G1_scaffold_319_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1247..1591
DNA (345bp) protein (115aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VHT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58619.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_061G1_scaffold_319_3
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2182..2334
DNA (153bp) protein (51aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9VH43_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25388.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_061G1_scaffold_319_4
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2557..2730)
DNA (174bp) protein (58aa)
Uncharacterized protein n=14 Tax=Clostridium RepID=N9X114_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63713.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L2_031_061G1_scaffold_319_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3048..3557
DNA (510bp) protein (170aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WR31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58616.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_061G1_scaffold_319_6
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3639..4439
DNA (801bp) protein (267aa)
Methyltransferase n=9 Tax=Clostridium RepID=N9X254_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25391.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Methyltransferase domain.
L2_031_061G1_scaffold_319_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4445..5323
DNA (879bp) protein (293aa)
33 kDa chaperonin n=9 Tax=Clostridium RepID=G5HU24_9CLOT
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Hsp33 protein
L2_031_061G1_scaffold_319_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5495..5692)
DNA (198bp) protein (66aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8RS61_9CLOT
Cold shock protein {ECO:0000313|EMBL:ENZ10495.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
cold-shock protein
L2_031_061G1_scaffold_319_9
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5956..6501
DNA (546bp) protein (182aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9X118_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25394.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L2_031_061G1_scaffold_319_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6582..7355)
DNA (774bp) protein (258aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9WR36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58611.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_031_061G1_scaffold_319_11
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7476..7901
DNA (426bp) protein (142aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9X258_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61316.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L2_031_061G1_scaffold_319_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7998..8825
DNA (828bp) protein (276aa)
ComEA protein n=7 Tax=Clostridium RepID=N9VHU5_9CLOT
ComEA protein {ECO:0000313|EMBL:ENZ58609.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
competence protein ComEA helix-hairpin-helix repeat region
L2_031_061G1_scaffold_319_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8887..9594
DNA (708bp) protein (236aa)
Two-component system response regulator n=8 Tax=Clostridium RepID=N9VH51_9CLOT
Two-component system response regulator {ECO:0000313|EMBL:ENZ58608.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_031_061G1_scaffold_319_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9627..10118
DNA (492bp) protein (164aa)
Acetyltransferase n=7 Tax=Clostridium RepID=N9X122_9CLOT
Acetyltransferase {ECO:0000313|EMBL:ENZ58607.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Acetyltransferases
L2_031_061G1_scaffold_319_15
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10122..10601
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Ribosomal RNA large subunit methyltransferase H n=7 Tax=Clostridium RepID=N9WR41_9CLOT
conserved hypothetical protein TIGR00246
L2_031_061G1_scaffold_319_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10784..11854
DNA (1071bp) protein (357aa)
DctP family TRAP transporter solute receptor n=6 Tax=Clostridium clostridioforme RepID=N9X266_9CLOT
DctP family TRAP transporter solute receptor {ECO:0000313|EMBL:ENZ58605.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
TRAP dicarboxylate transporter, DctP subunit
L2_031_061G1_scaffold_319_17
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11886..12362
DNA (477bp) protein (159aa)
C4-dicarboxylate transport system, small permease component n=10 Tax=Clostridium RepID=N9VHV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25402.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
C4-dicarboxylate transport system, small permease component
L2_031_061G1_scaffold_319_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12382..13689
DNA (1308bp) protein (436aa)
TRAP transporter, DctM subunit n=9 Tax=Clostridium RepID=N9VH58_9CLOT
TRAP transporter, DctM subunit {ECO:0000313|EMBL:ENZ10505.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
TRAP dicarboxylate transporter, DctM subunit
L2_031_061G1_scaffold_319_19
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13766..14770
DNA (1005bp) protein (335aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9X125_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61324.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
L2_031_061G1_scaffold_319_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14767..16236
DNA (1470bp) protein (490aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9WR48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58601.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
signal transduction histidine kinase, LytS
L2_031_061G1_scaffold_319_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16229..17467
DNA (1239bp) protein (413aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9X271_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58600.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
yesN; DNA-binding response regulator
L2_031_061G1_scaffold_319_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17464..18552
DNA (1089bp) protein (363aa)
DctP family TRAP transporter solute receptor n=7 Tax=Clostridium RepID=N9VHV6_9CLOT
DctP family TRAP transporter solute receptor {ECO:0000313|EMBL:ENZ58599.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
TRAP dicarboxylate family transporter subunit DctP
L2_031_061G1_scaffold_319_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18774..19253)
DNA (480bp) protein (160aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9VH64_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58598.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
AraC family transcriptional regulator
L2_031_061G1_scaffold_319_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19250..20371)
DNA (1122bp) protein (374aa)
Choloylglycine hydrolase n=6 Tax=Clostridium clostridioforme RepID=N9X131_9CLOT
Choloylglycine hydrolase {ECO:0000313|EMBL:ENZ58597.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
Displaying 24 items

View Taxonomy