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L2_031_061G1_scaffold_372

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_061G1_scaffold_372_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..93
DNA (93bp) protein (31aa)
Elongation factor Tu n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MG92_9CLOT
tuf2; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_031_061G1_scaffold_372_2
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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280..429
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MQT3_9CLOT
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_031_061G1_scaffold_372_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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476..706
DNA (231bp) protein (77aa)
Protein translocase subunit SecE n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKV1_CLOSA
preprotein translocase, SecE subunit
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_061G1_scaffold_372_4
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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740..1267
DNA (528bp) protein (176aa)
Transcription termination/antitermination protein NusG n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M7Q4_9CLOT
nusG; transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_031_061G1_scaffold_372_5
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1339..1764
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MP70_CLOSA
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_061G1_scaffold_372_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1820..2509
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=3 Tax=Clostridium butyricum RepID=C4IF65_CLOBU
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
rplA; 50S ribosomal protein L1
L2_031_061G1_scaffold_372_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2713..3219
DNA (507bp) protein (169aa)
50S ribosomal protein L10 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKA5_CLOSA
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_061G1_scaffold_372_8
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3275..3640
DNA (366bp) protein (122aa)
50S ribosomal protein L7/L12 n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MC25_9CLOT
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_031_061G1_scaffold_372_9
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3956..7660
DNA (3705bp) protein (1235aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. DL-VIII RepID=G7LYZ2_9CLOT
L2_031_061G1_scaffold_372_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7682..11212
DNA (3531bp) protein (1177aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6B0_9CLOT
L2_031_061G1_scaffold_372_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11453..11827
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5ML39_CLOSA
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_061G1_scaffold_372_12
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11979..12449
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Clostridium sp. DL-VIII RepID=G7LYZ5_9CLOT
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
rpsG; 30S ribosomal protein S7
L2_031_061G1_scaffold_372_13
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12540..14606
DNA (2067bp) protein (689aa)
Elongation factor G n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKW0_CLOSA
fusA1; elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_031_061G1_scaffold_372_14
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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14734..14814
DNA (81bp) protein (27aa)
Elongation factor Tu n=3 Tax=Bacteroides RepID=B3JHF5_9BACE
hypothetical protein
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
Displaying 14 items

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