ggKbase home page

L2_031_061G1_scaffold_457

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_061G1_scaffold_457_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..696
DNA (696bp) protein (232aa)
mtfA; putative RNA 2'-O-ribose methyltransferase (EC:2.1.1.-)
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058274};; 23S rRNA (cytidine2498-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01551}; 23S rRNA 2'-O-ribose methyltransferase RlmM {ECO:0000256|HAMAP-Rule:MF_01551}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
Ribosomal RNA large subunit methyltransferase M n=4 Tax=Escherichia coli RepID=L2ZGX4_ECOLX
L2_031_061G1_scaffold_457_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(740..1471)
DNA (732bp) protein (244aa)
L-fucose operon activator n=767 Tax=Enterobacteriaceae RepID=FUCR_ECOLI
L-fucose operon activator
Sugar-specific transcriptional regulator, TrmB family {ECO:0000313|EMBL:EII24774.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L2_031_061G1_scaffold_457_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1529..1951)
DNA (423bp) protein (141aa)
L-fucose mutarotase {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00010479}; EC=5.1.3.29 {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00148242};; Fucose 1-epimerase {ECO:0000256|HAMAP-Rule:MF_01662}; Type-2 mutarotase {ECO:0000256|HAMAP-Rule:MF_01662}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
L-fucose mutarotase n=1387 Tax=Enterobacteriaceae RepID=FUCM_ECO24
fucU; fucose operon protein FucU
L2_031_061G1_scaffold_457_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1953..3371)
DNA (1419bp) protein (473aa)
L-fuculokinase {ECO:0000256|HAMAP-Rule:MF_00986}; EC=2.7.1.51 {ECO:0000256|HAMAP-Rule:MF_00986};; L-fuculose kinase {ECO:0000256|HAMAP-Rule:MF_00986}; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
fucK; L-fuculokinase (EC:2.7.1.51)
L-fuculokinase n=2 Tax=Escherichia coli RepID=L4JID7_ECOLX
L2_031_061G1_scaffold_457_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3480..5255)
DNA (1776bp) protein (592aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
L-fucose isomerase n=245 Tax=Enterobacteriaceae RepID=FUCI_ECO7I
fucI; L-fucose isomerase FucI
L2_031_061G1_scaffold_457_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5288..6604)
DNA (1317bp) protein (439aa)
L-fucose-proton symporter n=585 Tax=Enterobacteriaceae RepID=FUCP_ECOLI
L-fucose transporter
H+ symporter permease {ECO:0000313|EMBL:KDX20892.1}; TaxID=1444180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-210-07_S3_C3.;"
L2_031_061G1_scaffold_457_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7151..7798
DNA (648bp) protein (216aa)
fucA; L-fuculose phosphate aldolase (EC:4.1.2.17)
L-fuculose phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; EC=4.1.2.17 {ECO:0000256|HAMAP-Rule:MF_00987};; L-fuculose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; TaxID=331111 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O139:H28 (strain E24377A / ETEC).;"
L-fuculose phosphate aldolase n=446 Tax=Enterobacteriaceae RepID=FUCA_ECO57
L2_031_061G1_scaffold_457_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7826..8974
DNA (1149bp) protein (383aa)
fucO; L-1,2-propanediol oxidoreductase (EC:1.1.1.77)
Lactaldehyde reductase {ECO:0000313|EMBL:EFU36629.1}; EC=1.1.1.77 {ECO:0000313|EMBL:EFU36629.1};; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
Lactaldehyde reductase n=852 Tax=Enterobacteriaceae RepID=FUCO_ECO57
L2_031_061G1_scaffold_457_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9029..9784)
DNA (756bp) protein (252aa)
Flap endonuclease Xni {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00008260}; Short=FEN {ECO:0000256|HAMAP-Rule:MF_01192};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00273675};; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
Flap endonuclease Xni n=1 Tax=Escherichia coli KTE147 RepID=L4JID2_ECOLX
ygdG; flap endonuclease-like protein
L2_031_061G1_scaffold_457_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9896..10099)
DNA (204bp) protein (68aa)
L-serine dehydratase n=1 Tax=Escherichia coli ATCC BAA-2215 RepID=V8E185_ECOLX
sdaB; L-serine dehydratase
L-serine dehydratase 2 {ECO:0000313|EMBL:EQP47600.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Displaying 10 items

View Taxonomy