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L2_031_061G1_scaffold_63

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_061G1_scaffold_63_1
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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58..744
DNA (687bp) protein (229aa)
Uncharacterized protein n=5 Tax=root RepID=S2XZT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87743.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Transposase and inactivated derivatives
L2_031_061G1_scaffold_63_2
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

813..1637
DNA (825bp) protein (275aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=S2XU82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55576.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Integrase catalytic region
L2_031_061G1_scaffold_63_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1878..2585)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6C7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76460.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_031_061G1_scaffold_63_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2588..2755)
DNA (168bp) protein (56aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B6C8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49444.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_031_061G1_scaffold_63_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2772..3563)
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7B6C9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66833.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hgdC; 2-hydroxyglutaryl-CoA dehydratase subunit C
L2_031_061G1_scaffold_63_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3576..5222)
DNA (1647bp) protein (549aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6D0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76463.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hgdA1; 2-hydroxyglutaryl-CoA dehydratase subunit D
L2_031_061G1_scaffold_63_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5219..6427)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6D1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76464.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hgdB1; 2-hydroxyglutaryl-CoA dehydratase subunit D
L2_031_061G1_scaffold_63_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6445..7212)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66830.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
CO dehydrogenase maturation factor
L2_031_061G1_scaffold_63_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7231..9504)
DNA (2274bp) protein (758aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6D3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76466.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
enoate reductase
L2_031_061G1_scaffold_63_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9668..10108)
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BTM8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49450.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Acetyltransferases
L2_031_061G1_scaffold_63_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10127..11515)
DNA (1389bp) protein (463aa)
Phenylhydantoinase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UD22_9FIRM
Phenylhydantoinase {ECO:0000313|EMBL:CCZ66827.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
PyrC; dihydroorotase
L2_031_061G1_scaffold_63_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11726..12370
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U6R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66826.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_031_061G1_scaffold_63_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12418..13350)
DNA (933bp) protein (311aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7B6D7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66825.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Lysophospholipase
L2_031_061G1_scaffold_63_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13359..14729)
DNA (1371bp) protein (457aa)
Citrate synthase (EC:2.3.3.5 2.3.3.1)
Citrate synthase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TU65_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_031_061G1_scaffold_63_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14861..15736)
DNA (876bp) protein (292aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TM41_9FIRM
L2_031_061G1_scaffold_63_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15753..16520)
DNA (768bp) protein (256aa)
hydrolase, TatD family (EC:3.1.21.-)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5UD18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66822.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_031_061G1_scaffold_63_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16653..17378)
DNA (726bp) protein (242aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U6Q5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66821.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_031_061G1_scaffold_63_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17491..18372)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66683.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
conserved hypothetical protein (putative transposase or invertase)
L2_031_061G1_scaffold_63_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18760..20709)
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67073.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats
L2_031_061G1_scaffold_63_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20709..21236)
DNA (528bp) protein (176aa)
Putative RNA polymerase sigma factor n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UDY5_9FIRM
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CCZ67072.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
RNA polymerase sigma factor, sigma-70 family
L2_031_061G1_scaffold_63_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21391..23658)
DNA (2268bp) protein (756aa)
Aconitase A (EC:4.2.1.3)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7E9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67071.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_031_061G1_scaffold_63_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23747..24322)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TN45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67070.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
FOG: FHA domain
L2_031_061G1_scaffold_63_23
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(24399..25199)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QUY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC25752.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L2_031_061G1_scaffold_63_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25212..26606)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67069.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_031_061G1_scaffold_63_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26619..28025)
DNA (1407bp) protein (469aa)
MBOAT family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUU7_9FIRM
MBOAT family protein {ECO:0000313|EMBL:CCZ67049.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted membrane protein involved in D-alanine export
L2_031_061G1_scaffold_63_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28038..31058)
DNA (3021bp) protein (1007aa)
N-acetylmuramidase/lysin n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMU3_9FIRM
N-acetylmuramidase/lysin {ECO:0000313|EMBL:CCZ67048.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
N-acetylmuramidase/lysin
L2_031_061G1_scaffold_63_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31380..32207)
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5UDW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67047.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Uncharacterized protein, putative amidase
L2_031_061G1_scaffold_63_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32223..33092)
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BSS6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18159.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hydrolase
L2_031_061G1_scaffold_63_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33120..34484)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6E9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76482.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L2_031_061G1_scaffold_63_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34653..35561
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67044.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
AraC-type DNA-binding domain-containing proteins
Displaying items 1-30 of 79 in total

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