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L2_031_124G1_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 159 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_124G1_scaffold_18_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..174)
DNA (174bp) protein (58aa)
GalD n=2 Tax=Bifidobacterium breve RepID=F9Y1U4_BIFBU
Permease protein of ABC transporter system for sugars, galactan metabolism
GalD {ECO:0000313|EMBL:ADO51665.1}; Permease protein of ABC transporter system for sugars, galactan metabolism {ECO:0000313|EMBL:ABE95116.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_031_124G1_scaffold_18_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(411..1760)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S3AK78_BIFBR
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI87442.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
family 1 extracellular solute-binding protein of ABC transporter system
L2_031_124G1_scaffold_18_3
unknown

Not on your lists

comp(1838..2074)
DNA (237bp) protein (79aa)

This feature has no annotations

L2_031_124G1_scaffold_18_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2898..6959)
DNA (4062bp) protein (1354aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4W4_BIFBR
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI87446.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
ATP-binding and permeaase modules of ABC transporter system
L2_031_124G1_scaffold_18_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7689..8045)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CSA0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87405.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Glucose/fructose transport protein
L2_031_124G1_scaffold_18_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8079..8336)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4T3_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87406.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Glucose/fructose transport protein
L2_031_124G1_scaffold_18_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8760..10583
DNA (1824bp) protein (608aa)
AMP-binding enzyme n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E063_BIFBR
AMP-binding enzyme {ECO:0000313|EMBL:ERI87407.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
AMP-binding protein
L2_031_124G1_scaffold_18_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11150..12265)
DNA (1116bp) protein (372aa)
Transcriptional regulator, LacI family n=3 Tax=Bifidobacterium breve RepID=F9Y1T9_BIFBU
Transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABE95111.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_031_124G1_scaffold_18_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12427..13287)
DNA (861bp) protein (287aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Ribonuclease n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4T7_BIFBR
rnhB; Ribonuclease HII
L2_031_124G1_scaffold_18_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13312..14235)
DNA (924bp) protein (308aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Signal peptidase I n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E067_BIFBR
Signal peptidase I
L2_031_124G1_scaffold_18_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(14404..14853)
DNA (450bp) protein (150aa)
50S ribosomal protein L19 n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTM5_BIFBR
LSU ribosomal protein L19P
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_031_124G1_scaffold_18_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15140..15655)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AK70_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76729.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L2_031_124G1_scaffold_18_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15769..17559
DNA (1791bp) protein (597aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BMK5_BIFBR
Permease protein of ABC transporter system
Permease protein of ABC transporter system {ECO:0000313|EMBL:AHJ18689.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_031_124G1_scaffold_18_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17689..19107
DNA (1419bp) protein (473aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4U1_BIFBR
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI87416.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
ATP-binding protein of ABC transporter system
L2_031_124G1_scaffold_18_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19618..21318)
DNA (1701bp) protein (567aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
gpi; Glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=5 Tax=Bifidobacterium breve RepID=F6C7G8_BIFBA
L2_031_124G1_scaffold_18_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22193..23194
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZQX6_BIFBR
putative membrane spanning protein with auxin efflux carrier domain
Transporter, auxin efflux carrier family protein {ECO:0000313|EMBL:ERI87418.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_031_124G1_scaffold_18_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23320..24093)
DNA (774bp) protein (258aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CAA2_BIFBR
Hypothetical protein with HAM1 family domain
L2_031_124G1_scaffold_18_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24215..24991)
DNA (777bp) protein (259aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Ribonuclease PH n=5 Tax=Bifidobacterium breve RepID=F6C7G5_BIFBA
Ribonuclease PH
L2_031_124G1_scaffold_18_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25529..26851)
DNA (1323bp) protein (441aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4U5_BIFBR
Nicotinate phosphoribosyltransferase
L2_031_124G1_scaffold_18_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26959..27585
DNA (627bp) protein (209aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=H3KZJ1_BIFBR
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ20606.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_031_124G1_scaffold_18_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27593..28021)
DNA (429bp) protein (143aa)
Transcriptional regulator, MerR family n=3 Tax=Bifidobacterium breve RepID=F6C7G2_BIFBA
Transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AHJ18681.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_031_124G1_scaffold_18_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28280..29290
DNA (1011bp) protein (337aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CAA7_BIFBR
Oxidoreductase
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:ERI87424.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_031_124G1_scaffold_18_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29486..29770)
DNA (285bp) protein (95aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=F6C7G0_BIFBA
Uncharacterized protein {ECO:0000313|EMBL:BAQ99375.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Hypothetical protein
L2_031_124G1_scaffold_18_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29872..30372
DNA (501bp) protein (167aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Phosphopantetheine adenylyltransferase n=6 Tax=Bifidobacterium breve RepID=F6C7F9_BIFBA
Phosphopantetheine adenylyltransferase
L2_031_124G1_scaffold_18_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30378..31163
DNA (786bp) protein (262aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C7F8_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26832.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_031_124G1_scaffold_18_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31279..31899
DNA (621bp) protein (207aa)
Putative ACR n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTN8_BIFBR
Putative ACR {ECO:0000313|EMBL:ERI87428.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
L2_031_124G1_scaffold_18_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


31989..32183
DNA (195bp) protein (65aa)
50S ribosomal protein L32 n=6 Tax=Bifidobacterium breve RepID=F6C7F6_BIFBA
LSU ribosomal protein L32P
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_031_124G1_scaffold_18_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32354..33097
DNA (744bp) protein (248aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Ribonuclease 3 n=6 Tax=Bifidobacterium breve RepID=F6C7F5_BIFBA
L2_031_124G1_scaffold_18_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33257..35221
DNA (1965bp) protein (655aa)
Acetolactate synthase large subunit {ECO:0000313|EMBL:BAQ99369.1}; Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:EFE90007.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EFE90007.1};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Acetolactate synthase, large subunit, biosynthetic type n=2 Tax=Bifidobacterium breve RepID=D4BMI8_BIFBR
Acetolactate synthase large subunit
L2_031_124G1_scaffold_18_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35238..35795
DNA (558bp) protein (186aa)
acetolactate synthase n=1 Tax=Bifidobacterium breve RepID=UPI0002F7EFDC
Acetolactate synthase small subunit {ECO:0000313|EMBL:BAQ99368.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Acetolactate synthase small subunit
Displaying items 1-30 of 159 in total

View Taxonomy