ggKbase home page

L2_031_124G1_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_124G1_scaffold_68_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..766
DNA (765bp) protein (255aa)
Response regulator receiver protein n=2 Tax=Clostridium butyricum RepID=M8K8T2_CLOBU
Two-component response regulator yesN {ECO:0000313|EMBL:KJZ86049.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_031_124G1_scaffold_68_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

783..2090
DNA (1308bp) protein (436aa)
UPI0003D61AE5 related cluster n=1 Tax=unknown RepID=UPI0003D61AE5
Putative ABC transporter extracellular-binding protein yurOprecursor {ECO:0000313|EMBL:ETI88247.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
extracellular solute-binding protein
L2_031_124G1_scaffold_68_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2318..3412
DNA (1095bp) protein (365aa)
Multiple sugar-binding transport ATP-binding protein MsmK n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNJ5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95434.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family
L2_031_124G1_scaffold_68_4
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3438..4115
DNA (678bp) protein (226aa)
Putative membrane protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD43_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ89535.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
L2_031_124G1_scaffold_68_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4254..5540
DNA (1287bp) protein (429aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KH21_CLOBU
Multiple sugar ABC transporter, substrate-binding protein {ECO:0000313|EMBL:KJZ86098.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC-type sugar transport system, periplasmic component
L2_031_124G1_scaffold_68_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5632..6576
DNA (945bp) protein (315aa)
ABC-type sugar transport system, permease component n=2 Tax=Clostridium butyricum RepID=M8K8T8_CLOBU
N-Acetyl-D-glucosamine ABC transport system, permease protein {ECO:0000313|EMBL:KJZ86108.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC-type sugar transport system, permease component
L2_031_124G1_scaffold_68_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6580..7428
DNA (849bp) protein (283aa)
Sugar transport system permease protein n=4 Tax=Clostridium butyricum RepID=B1QZ77_CLOBU
Sugar ABC transporter permease {ECO:0000313|EMBL:KHD16394.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ABC-type sugar transport system, permease component
L2_031_124G1_scaffold_68_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7569..8585
DNA (1017bp) protein (339aa)
UPI0003D6637F related cluster n=1 Tax=unknown RepID=UPI0003D6637F
Uncharacterized protein {ECO:0000313|EMBL:KJZ86106.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative glycosylase
L2_031_124G1_scaffold_68_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8664..10406
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z791_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86084.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
methyl-accepting chemotaxis sensory transducer
L2_031_124G1_scaffold_68_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10443..11564
DNA (1122bp) protein (374aa)
UPI0003D5FF20 related cluster n=1 Tax=unknown RepID=UPI0003D5FF20
Putative xylanase {ECO:0000313|EMBL:KJZ86104.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
GDSL-like lipase/acylhydrolase family
L2_031_124G1_scaffold_68_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11788..12705
DNA (918bp) protein (306aa)
ROK family protein n=2 Tax=Clostridium butyricum RepID=M8K8U2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35577.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ROK family protein
L2_031_124G1_scaffold_68_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12781..14058
DNA (1278bp) protein (426aa)
Putative bacterial extracellular solute-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMA8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35578.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
sugar ABC transporter substrate-binding protein
L2_031_124G1_scaffold_68_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14169..15344
DNA (1176bp) protein (392aa)
UPI0003D69A57 related cluster n=1 Tax=unknown RepID=UPI0003D69A57
Uncharacterized protein {ECO:0000313|EMBL:KJZ95482.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
GDSL family lipase
L2_031_124G1_scaffold_68_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15609..17006
DNA (1398bp) protein (466aa)
Beta-glucosidase n=2 Tax=Clostridium butyricum RepID=M8JD54_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35580.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Beta-glucosidase
L2_031_124G1_scaffold_68_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17189..18169
DNA (981bp) protein (327aa)
gmuF; putative mannose-6-phosphate isomerase GmuF (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KH33_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95467.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_031_124G1_scaffold_68_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18312..19022
DNA (711bp) protein (237aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K8U6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86123.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
gmuR; HTH-type transcriptional regulator GmuR
L2_031_124G1_scaffold_68_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19129..21090)
DNA (1962bp) protein (654aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
fbp; fructose-1,6-bisphosphatase class 3 2 (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 3 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMB3_CLOBU
L2_031_124G1_scaffold_68_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21362..21922)
DNA (561bp) protein (187aa)
Adenylate cyclase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNL3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35584.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
adenylate cyclase
L2_031_124G1_scaffold_68_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21975..22769)
DNA (795bp) protein (265aa)
Histidinol phosphate phosphatase HisJ family n=2 Tax=Clostridium butyricum RepID=B1QZ89_CLOBU
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:EEP52825.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
HisJ family histidinol phosphate phosphatase
L2_031_124G1_scaffold_68_20
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22946..23983
DNA (1038bp) protein (346aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QZ90_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95451.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
37-kD nucleoid-associated bacterial protein
L2_031_124G1_scaffold_68_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24189..26813
DNA (2625bp) protein (875aa)
Polysaccharide deacetylase domain protein n=2 Tax=Clostridium butyricum RepID=B1QZ91_CLOBU
Polysaccharide deacetylase {ECO:0000313|EMBL:KJZ86046.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
polysaccharide deacetylase
L2_031_124G1_scaffold_68_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26869..28713
DNA (1845bp) protein (615aa)
Chitin synthase n=2 Tax=Clostridium butyricum RepID=M8JMC1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35588.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
glycosyl transferase family 2
L2_031_124G1_scaffold_68_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28710..30401
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AS73_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35589.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_031_124G1_scaffold_68_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30476..31507
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7B0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35590.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_031_124G1_scaffold_68_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31671..32222
DNA (552bp) protein (184aa)
Transmembranal protein BioY n=3 Tax=Clostridium butyricum RepID=B1QZ95_CLOBU
Substrate-specific component BioY of biotin ECF transporter {ECO:0000313|EMBL:KJZ86122.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_031_124G1_scaffold_68_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32387..33307)
DNA (921bp) protein (307aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
argF; ornithine carbamoyltransferase ArgF (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AU76_CLOBU
L2_031_124G1_scaffold_68_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33348..34529)
DNA (1182bp) protein (394aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
argD; acetylornithine aminotransferase ArgD (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMC9_CLOBU
L2_031_124G1_scaffold_68_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34667..35518)
DNA (852bp) protein (284aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Acetylglutamate kinase n=4 Tax=Clostridium butyricum RepID=B1QZ98_CLOBU
acetylglutamate kinase
L2_031_124G1_scaffold_68_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35623..36846)
DNA (1224bp) protein (408aa)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD69_CLOBU
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
bifunctional ornithine acetyltransferase/N-acetylglutamate synthase
L2_031_124G1_scaffold_68_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37088..38122)
DNA (1035bp) protein (345aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase ArgC (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=2 Tax=Clostridium butyricum RepID=M8KH50_CLOBU
Displaying items 1-30 of 73 in total

View Taxonomy