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L2_031_124G1_scaffold_76

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_124G1_scaffold_76_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..134
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 5521 RepID=B1R1W2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ89438.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_031_124G1_scaffold_76_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

357..1367
DNA (1011bp) protein (337aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AF61_CLOBU
Putative transposase {ECO:0000313|EMBL:KJZ87670.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_031_124G1_scaffold_76_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1746..4295
DNA (2550bp) protein (850aa)
yloB2; calcium-transporting ATPase YloB (EC:3.6.3.8)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J6X4_CLOBU
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:ENZ31438.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_031_124G1_scaffold_76_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4559..4990)
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QX35_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87706.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_031_124G1_scaffold_76_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5365..6318
DNA (954bp) protein (318aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QX34_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55185.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_031_124G1_scaffold_76_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6444..7490
DNA (1047bp) protein (349aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=3 Tax=Clostridium butyricum RepID=B1QX33_CLOBU
L2_031_124G1_scaffold_76_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7627..9942
DNA (2316bp) protein (772aa)
ycbZ; putative Lon protease (EC:3.4.21.-)
ATP-dependent protease n=4 Tax=Clostridium butyricum RepID=B1QX32_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31434.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_031_124G1_scaffold_76_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10138..10473
DNA (336bp) protein (112aa)
Anti-sigma F factor antagonist n=4 Tax=Clostridium butyricum RepID=B1QX31_CLOBU
Anti-sigma F factor antagonist {ECO:0000256|RuleBase:RU003749}; Stage II sporulation protein {ECO:0000256|RuleBase:RU003749}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
anti-sigma-factor antagonist
L2_031_124G1_scaffold_76_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10489..10920
DNA (432bp) protein (144aa)
Anti-sigma F factor {ECO:0000256|HAMAP-Rule:MF_00637}; EC=2.7.11.1 {ECO:0000256|HAMAP-Rule:MF_00637};; Stage II sporulation protein AB {ECO:0000256|HAMAP-Rule:MF_00637}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
spoIIAB; anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=4 Tax=Clostridium butyricum RepID=B1QX30_CLOBU
L2_031_124G1_scaffold_76_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10930..11688
DNA (759bp) protein (253aa)
RNA polymerase sigma factor n=4 Tax=Clostridium butyricum RepID=B1QX29_CLOBU
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
sigF; RNA polymerase sigma-F factor SigF
L2_031_124G1_scaffold_76_11
unknown

Not on your lists

11716..11817
DNA (102bp) protein (34aa)

This feature has no annotations

L2_031_124G1_scaffold_76_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12028..12498
DNA (471bp) protein (157aa)
Stage V sporulation protein AC n=4 Tax=Clostridium butyricum RepID=B1QX28_CLOBU
Stage V sporulation protein AC {ECO:0000313|EMBL:EEP55603.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
spoVAC1; stage V sporulation protein AC
L2_031_124G1_scaffold_76_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12669..13688
DNA (1020bp) protein (340aa)
Stage V sporulation protein AD n=4 Tax=Clostridium butyricum RepID=B1QX27_CLOBU
Stage V sporulation protein AD (SpoVAD) {ECO:0000313|EMBL:KJZ87639.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
spoVAD1; stage V sporulation protein AD
L2_031_124G1_scaffold_76_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13717..14073
DNA (357bp) protein (119aa)
Stage V sporulation protein AE n=3 Tax=Clostridium butyricum RepID=B1QX26_CLOBU
Stage V sporulation protein AE (SpoVAE) {ECO:0000313|EMBL:KJZ87679.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
spoVAE; stage V sporulation protein AE
L2_031_124G1_scaffold_76_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14405..16924
DNA (2520bp) protein (840aa)
UPI0003D5B4FB related cluster n=1 Tax=unknown RepID=UPI0003D5B4FB
ATPase {ECO:0000313|EMBL:KHD15744.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
E1-E2 ATPase-associated domain-containing protein
L2_031_124G1_scaffold_76_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16929..18629
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YV06_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31426.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ComEC/Rec2-like protein
L2_031_124G1_scaffold_76_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18759..19856
DNA (1098bp) protein (366aa)
UPI0003D67970 related cluster n=1 Tax=unknown RepID=UPI0003D67970
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ETI89066.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
DNA polymerase III, delta subunit
L2_031_124G1_scaffold_76_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19948..20211)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=4 Tax=Clostridium butyricum RepID=B1QX22_CLOBU
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rpsT; 30S ribosomal protein S20
L2_031_124G1_scaffold_76_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20420..21403
DNA (984bp) protein (328aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
gpr; germination protease Gpr (EC:3.4.24.78)
Germination protease n=2 Tax=Clostridium butyricum RepID=M8J6W1_CLOBU
L2_031_124G1_scaffold_76_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21632..22744
DNA (1113bp) protein (371aa)
Stage II sporulation P family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JH57_CLOBU
Stage II sporulation protein P {ECO:0000313|EMBL:ENZ31422.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
stage II sporulation P family protein
L2_031_124G1_scaffold_76_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22933..23271
DNA (339bp) protein (113aa)
Putative lipoprotein n=2 Tax=Clostridium butyricum RepID=B1QX19_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87682.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_031_124G1_scaffold_76_22
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23546..25351
DNA (1806bp) protein (602aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
lepA; elongation factor 4 (EC:3.6.5.n1)
Elongation factor 4 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2G3_CLOBU
L2_031_124G1_scaffold_76_23
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25421..26548
DNA (1128bp) protein (376aa)
hemN; oxygen-independent coproporphyrinogen-III oxidase 1 (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase n=2 Tax=Clostridium butyricum RepID=C4IDG5_CLOBU
Putative radical SAM family enzyme in heat shock {ECO:0000313|EMBL:KJZ82757.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
L2_031_124G1_scaffold_76_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26802..27833
DNA (1032bp) protein (344aa)
Heat-inducible transcription repressor hrcA n=4 Tax=Clostridium butyricum RepID=B1QX16_CLOBU
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hrcA; heat-inducible transcription repressor HrcA
L2_031_124G1_scaffold_76_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27871..28476
DNA (606bp) protein (202aa)
Protein GrpE n=4 Tax=Clostridium butyricum RepID=B1QX15_CLOBU
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
grpE; protein GrpE
L2_031_124G1_scaffold_76_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28572..30413
DNA (1842bp) protein (614aa)
Chaperone protein DnaK n=4 Tax=Clostridium butyricum RepID=B1QX14_CLOBU
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
dnaK; chaperone protein DnaK
L2_031_124G1_scaffold_76_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30566..31699
DNA (1134bp) protein (378aa)
Chaperone protein DnaJ n=3 Tax=Clostridium butyricum RepID=B1QX13_CLOBU
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
chaperone protein DnaJ
L2_031_124G1_scaffold_76_28
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31816..32229)
DNA (414bp) protein (138aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QX12_CLOBU
Flagellar hook-basal body complex protein FliE {ECO:0000313|EMBL:KJZ97764.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
viral A-type inclusion protein repeat
L2_031_124G1_scaffold_76_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32478..34028
DNA (1551bp) protein (517aa)
Ferredoxin-nitrite reductase n=2 Tax=Clostridium butyricum RepID=B1QX10_CLOBU
Nitrite/sulfite reductase 4Fe-4S domain protein {ECO:0000313|EMBL:EEP55318.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ferredoxin-nitrite reductase
L2_031_124G1_scaffold_76_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34401..35063
DNA (663bp) protein (221aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=2 Tax=Clostridium butyricum RepID=M8K2F3_CLOBU
Displaying items 1-30 of 63 in total

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