ggKbase home page

L2_031_124G1_scaffold_169

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_124G1_scaffold_169_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

797..2041
DNA (1245bp) protein (415aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
metK; S-adenosylmethionine synthase MetK (EC:2.5.1.6)
S-adenosylmethionine synthase n=4 Tax=Clostridium butyricum RepID=M8JH07_CLOBU
L2_031_124G1_scaffold_169_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2305..4602
DNA (2298bp) protein (766aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
helicase, RecD/TraA family (EC:3.1.11.5)
Helicase, RecD/TraA family n=2 Tax=Clostridium butyricum RepID=M8JFP9_CLOBU
L2_031_124G1_scaffold_169_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4618..5634
DNA (1017bp) protein (339aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R2K7_CLOBU
ComF operon protein A, DNA transporter ATPase {ECO:0000313|EMBL:KJZ84454.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
superfamily II DNA/RNA helicase required for DNA uptake
L2_031_124G1_scaffold_169_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5607..6272
DNA (666bp) protein (222aa)
ComF protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAK2_CLOBU
ComF protein {ECO:0000313|EMBL:EEP55638.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ComF protein
L2_031_124G1_scaffold_169_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6622..7155
DNA (534bp) protein (178aa)
Sigma 54 modulation protein/ribosomal protein S30EA n=2 Tax=Clostridium butyricum RepID=C4IEB2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD14526.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ribosome-associated factor Y
L2_031_124G1_scaffold_169_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7501..10209
DNA (2709bp) protein (903aa)
Protein translocase subunit SecA n=2 Tax=Clostridium butyricum RepID=M8JH02_CLOBU
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
secA; preprotein translocase subunit SecA
L2_031_124G1_scaffold_169_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10523..11566
DNA (1044bp) protein (348aa)
Peptide chain release factor 2 n=2 Tax=Clostridium butyricum RepID=M8JFP5_CLOBU
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
prfB; peptide chain release factor 2
L2_031_124G1_scaffold_169_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11626..13014)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUF8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31196.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
aminopeptidase
L2_031_124G1_scaffold_169_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13112..13216)
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUU9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31195.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_031_124G1_scaffold_169_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13213..13545)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AEL1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96843.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_031_124G1_scaffold_169_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13755..14450
DNA (696bp) protein (232aa)
Regulatory protein VanR n=2 Tax=Clostridium butyricum RepID=M8JHZ8_CLOBU
DNA-binding response regulator {ECO:0000313|EMBL:KJZ84455.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
gtcR; response regulator GtcR
L2_031_124G1_scaffold_169_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14440..15936
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGG3_CLOBU
integral membrane sensor signal transduction histidine kinase
L2_031_124G1_scaffold_169_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16057..16962
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUF3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31191.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
CAAX amino terminal protease family
L2_031_124G1_scaffold_169_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17157..19328
DNA (2172bp) protein (724aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUU4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31190.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Tex-like protein
L2_031_124G1_scaffold_169_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19416..20336
DNA (921bp) protein (307aa)
Exported membrane protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J7K1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84447.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
DMT superfamily permease
L2_031_124G1_scaffold_169_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20785..21360
DNA (576bp) protein (192aa)
Riboflavin transporter n=4 Tax=Clostridium butyricum RepID=B1R163_CLOBU
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
riboflavin transporter
L2_031_124G1_scaffold_169_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21428..21871)
DNA (444bp) protein (148aa)
Ribosomal-protein-S18p-alanine acetyltransferase {ECO:0000313|EMBL:KJZ84413.1}; EC=2.3.1.- {ECO:0000313|EMBL:KJZ84413.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rimI; putative ribosomal-protein-alanine acetyltransferase RimI (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGG7_CLOBU
L2_031_124G1_scaffold_169_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21855..22589)
DNA (735bp) protein (245aa)
Glycoprotease family protein n=4 Tax=Clostridium butyricum RepID=B1R165_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96840.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
yeaZ; tRNA threonylcarbamoyl adenosine modification protein YeaZ
L2_031_124G1_scaffold_169_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22586..23047)
DNA (462bp) protein (154aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R166_CLOBU
YjeE family ATPase {ECO:0000313|EMBL:ENZ31185.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ydiB; UPF0079 ATP-binding protein YdiB
L2_031_124G1_scaffold_169_20
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23325..24293
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEK1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96865.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
periplasmic solute binding protein
L2_031_124G1_scaffold_169_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24629..25546
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A413_CLOBU
MSM (Multiple sugar metabolism) operon regulatory protein {ECO:0000313|EMBL:KJZ84436.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
AraC family transcriptional regulator
L2_031_124G1_scaffold_169_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25669..28059
DNA (2391bp) protein (797aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGE2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31182.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Alpha-glucosidase
L2_031_124G1_scaffold_169_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28196..28570
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUD1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31181.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
RutC family protein
L2_031_124G1_scaffold_169_24
unknown

Not on your lists

28588..28722
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 24 items

View Taxonomy